Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag0313 | ATGCCGAGAAAAGGAATGAGGAGTCTTTTTTTCCATTCGAAACCTCATCATGATTCGAATTCCCATAATCATGCAACCACCTCATCGATTCCGTCAACTCCTGCACGCCGGAGCTTCTCTGAATCGATGAACGATCATATCATTGAATCGGCTGCGGAGATGATTGCGAAATGGAATCCAGATGCTTCCACCTACGCCAAAGTTACTTCCATATTCTATGAGAGCAAAACGGAAGCGTTACAGTTCATCAAATGCGTTAACGATCTCCAGAAATCCATGCATTTTCTAGTATCGGAAAATTCAAATTCGGAGAAACTCGTGCAGGCTCAGAGTCTCATGGAGATCGCGATGAAGCGGCTTCAGAAGGAGTTCTATCAAATTCTCTCCATGAACAGGGCTCACCTCGATCCGGAATCAGTTTCTACACGATCATCGCGTGCCTCAGTTAGATCTAGCACTTCCGACTATGAAGATGAAGGTACACCAGACGACGAGATTTGTATCGCAGGTGATTCCATCACCGAAGTCGAGGAAGTTTCTTCCATAGCCATGGCGGATCTGAAGGCCATCGCTGAATGCATGATCTCCTCCGGTTACGCTAAAGAGTGCCTAAGCATTTACAAAATTATTCGGAAATCGATAATCGATGAAGGAATCTACCATCTAGGAGTTGAGAAAATCAGTAACTCTCATTTCAATAAGATGGATTGGGAAGCTATCGATTTCAGAATAAAAAACTGGTTGGGGGTTGTAAAAATCGCTATGAGAACGCTCTTCAATGGAGAACGAATCCTGTGCGACCATGTCTACGGTTCGTCTGAAGCAATCAGAGAATCCTGCTTCGCTGAGATTTCGAAAGATGGCGCGATGCTTCTCTTTTCACTCCCTCAACTCGTCTCGAAGAGCAAGAAAATTTCATCGACGGAAAAGATTTTCCGTTTACTCGACATGTATATTGCGATCTACGAAACCTGGCCGGATATTGAATCCATCTTCTCACACGAATCCACCTCGCCAGTCCGACTGCAAGCTGAAACCTCGTTCATCCGAATCGCTGAGTCGGTTCACACGATGCTTTCGGAATTCGAATCGTCCATTCAGAAGGACTCTACGAAATCACCTGTTGCCGGCGGTGGAGTTCACTCGTTAACGCTTCACACGATGGATTACCTCTCTACTCTCGCTGATTACACTGACGTCCTCAATTTCATTTTGGCTCACTCTCCACCGCCGGAAAATTCATTCATGCCGGAATATCACTTCGATAGTCTAGAATCCGATGATTCTCCCGCTCCGGCGTTCTCTTTACGCGCGACATGGATCATCTTAATCCTCGTCTCTAAGCTCGACGTCAAAGCAAAATACTACAAGGACGTGTCGCAGTCGTATCTATTTTTAGCAAACAACATCCGACATGTCGTCTCGAAGGCAGGCACATCGAACCTCCGGTACGTACTCGGTGAACGGTGGATCACAAAACACGAGGCGAAGGTGAAACAGTTCGCGGAGAATTACGAGCGGTTAGCATGGGGCCAGGTCTTCTCATCGTTACCGCATCGAAATTCAACGACCGAGATATCACCGGCGGAAGCAATGCAGTGGTTTAAGAAATTCAATTCGTCTTTTCAAGAAGCATACATGAAACAGGGATTGTGCACCGTACCGGATCCGAAACTCCAAGACGACATTAAGGAATCCATTGTGAACAAGATAACGCCGGTATATCGGAAGTTTTACAATGCACACAGGCTTAGAGTGGAACGGGAGAAGAATATAGCAGGTTTGAATATTATCAGATATGCCCCTGAAGAAGTTGATAGTTATTTATCGGACCTGTTCTTTGGATCGGCCGAGTCGAGTGGAAATTTGTCGTCTTCTTCGGTATTCTCATCGTCTCATCCCCGACGATCTTTTTGTGAAAGGTAA | 1926 | 45.74 | MPRKGMRSLFFHSKPHHDSNSHNHATTSSIPSTPARRSFSESMNDHIIESAAEMIAKWNPDASTYAKVTSIFYESKTEALQFIKCVNDLQKSMHFLVSENSNSEKLVQAQSLMEIAMKRLQKEFYQILSMNRAHLDPESVSTRSSRASVRSSTSDYEDEGTPDDEICIAGDSITEVEEVSSIAMADLKAIAECMISSGYAKECLSIYKIIRKSIIDEGIYHLGVEKISNSHFNKMDWEAIDFRIKNWLGVVKIAMRTLFNGERILCDHVYGSSEAIRESCFAEISKDGAMLLFSLPQLVSKSKKISSTEKIFRLLDMYIAIYETWPDIESIFSHESTSPVRLQAETSFIRIAESVHTMLSEFESSIQKDSTKSPVAGGGVHSLTLHTMDYLSTLADYTDVLNFILAHSPPPENSFMPEYHFDSLESDDSPAPAFSLRATWIILILVSKLDVKAKYYKDVSQSYLFLANNIRHVVSKAGTSNLRYVLGERWITKHEAKVKQFAENYERLAWGQVFSSLPHRNSTTEISPAEAMQWFKKFNSSFQEAYMKQGLCTVPDPKLQDDIKESIVNKITPVYRKFYNAHRLRVEREKNIAGLNIIRYAPEEVDSYLSDLFFGSAESSGNLSSSSVFSSSHPRRSFCER | 641 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 1592344 | 1594269 | - | Conep03aG0032000.1 | Cone3ag0313 | 433772 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag0313 | 641 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
| Cone3ag0313 | 641 | MobiDBLite | consensus disorder prediction | 619 | 641 | - | - | |
| Cone3ag0313 | 641 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 46 | 616 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
| Cone3ag0313 | 641 | SUPERFAMILY | Cullin repeat-like | 76 | 613 | IPR016159 | - | |
| Cone3ag0313 | 641 | MobiDBLite | consensus disorder prediction | 619 | 634 | - | - | |
| Cone3ag0313 | 641 | Pfam | Exocyst complex component Exo70 N-terminal | 48 | 129 | - | - | |
| Cone3ag0313 | 641 | MobiDBLite | consensus disorder prediction | 22 | 38 | - | - | |
| Cone3ag0313 | 641 | Gene3D | Exocyst complex component Exo70 | 63 | 622 | - | - | |
| Cone3ag0313 | 641 | MobiDBLite | consensus disorder prediction | 138 | 161 | - | - | |
| Cone3ag0313 | 641 | Pfam | Exo70 exocyst complex subunit C-terminal | 245 | 611 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag0313 | Cone-Chr3:1592344 | Cone5ag1050 | Cone-Chr5:4612611 | 3.22E-65 | dispersed | |
| Cone1ag0674 | Cone-Chr1:6316183 | Cone3ag0313 | Cone-Chr3:1592344 | 3.06E-209 | wgd | |
| Cone10ag0284 | Cone-Chr10:1348849 | Cone3ag0313 | Cone-Chr3:1592344 | 0 | wgd | |
| Cone11ag1101 | Cone-Chr11:8582489 | Cone3ag0313 | Cone-Chr3:1592344 | 3.36E-163 | wgd | |
| Cone11ag1266 | Cone-Chr11:9409923 | Cone3ag0313 | Cone-Chr3:1592344 | 5.80E-197 | wgd | |
| Cone13ag1312 | Cone-Chr13:9740457 | Cone3ag0313 | Cone-Chr3:1592344 | 1.89E-225 | wgd | |
| Cone18ag0321 | Cone-Chr18:1595951 | Cone3ag0313 | Cone-Chr3:1592344 | 5.81E-193 | wgd | |
| Cone18ag0474 | Cone-Chr18:2306911 | Cone3ag0313 | Cone-Chr3:1592344 | 1.33E-166 | wgd | |
| Cone19ag1300 | Cone-Chr19:8771675 | Cone3ag0313 | Cone-Chr3:1592344 | 5.78E-225 | wgd | |
| Cone3ag0313 | Cone-Chr3:1592344 | Cone5ag1180 | Cone-Chr5:5298449 | 3.80E-203 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag0313 | K07195 | - | vvi:100267121 | 733.406 |