Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0322 ATGAATGAGTTTTGGATGACCAAAGCAGCTGGGTCCTTGAATGATGGTGGGTTGCCTTATGGTGATTCGTTTACGAGTGAACAGAAGTGTTCTCATCTGTGGTTCATGGACAATCCGGAGTTGGAGCAGTATCCTAACAAGAAACAGGCTGTTGAAGTTCCAAATACTAGTTTATTTACAGGAATGTTAAATTCTAATGTTGCTTGGGGAAGTACTTCCAGTTTTCACTCACTCTTCGGCTATCCTACTGAACGGCTACTTGATTCTGAGACAATAAGGACTGCCAATTTCGATGACAAGATCGCTCAATCAATTGGCACAGAAAAAATTAACACTGAGAGACAAGTTGATGAAAATGCAATGGGGAATGCTTCTTTATTTGATGAAAAAGCACTGGCTGACCCTAGGTCAGGTGTAAGTTATGGTGGATTTAGAAAAGTGAAAGTGAACGAGGTCAATGACTCGGAAAATGTCATGCCTATGTCAATGAGACTCACCTGGTATTCAGGGGATACCAGCTCTCTGTCTACAGCTCATACTTACAAAAAGGCAGATGGAAGTGCAATATCTATGGGTCTCACTTATGACAAAGTTGAACATAAGAACTCGCCTGCGGAGAATGCTTATGACAGGGAGGATAACCATGTCATAACAATCGGACAACCCTATACAAGAGGGGGAGAGAGTAAAGCAAGTGGTCAGACATACGGAGAGAGTAATACTACTGCATCATCTGGTAAAACACTTAGTGATGCTGGAAGCAACATTGTGTCTGGTGGTCAAATATACACAAGTGAAAGTGCCTTACCAACGGGCCACTTGTTCAGTAAAGGGGAAGATAGCACTCAATGGTTTGGTCAAACCTTCACTGAAAACAATAATAATTCCATGAAACCTGGTTACTCTTACAATAATGGCGAGAGTACCATCATTTCTTTTGGTGGAGATAATGATGACAATAGAAATGCCTCAACCAAGCTCTTACCTAGTTATGGCCTATTAATGGATCGTGCTTCTGCTCAGAAATCAGATGTGTTATCTGAAAATGAGATATTGAAATTTAATGTTGATGCAAATGCTACTAAGATAACTCCTTTGGGAGTCAAAAGTGTTTGCAAGAGGAAAGATGAGCTGAAAATTTCTAAAAAAGTTTCTTCAAACAACTTTCCATCTAATGTTAGGAGTTTGCTATCGACAGGAATGCTGGATGGTGTTCCTGTAACGTACATTGCCTGGTCACGGGAGAAGGAGCTCCATGGTGTTATAAAGGGCTCTGGATATTTATGCGGCTGTCAATCATGCAATTTATCCAAGGTGATCAATGCATATGAATTTGAGCGTCATGCTAGTTGCAAAACAAAACACCCTAATAATCATATATACTTTGAGAATGGGAAGACGATCTATGGGATCGTCCAAGAGCTTAGGAGTGCACCGCAAAATATTTTGTTTGAAGTTATTCAGACTATAACAGGTTCACCTATCAATCAGAAGTCATTCTGTGCTTGGAAAGAATCTTTTCTAGGTGCCACCCGTGAACTTCAGCTAATATATGGTAACAGTTAG 1566 40.36 MNEFWMTKAAGSLNDGGLPYGDSFTSEQKCSHLWFMDNPELEQYPNKKQAVEVPNTSLFTGMLNSNVAWGSTSSFHSLFGYPTERLLDSETIRTANFDDKIAQSIGTEKINTERQVDENAMGNASLFDEKALADPRSGVSYGGFRKVKVNEVNDSENVMPMSMRLTWYSGDTSSLSTAHTYKKADGSAISMGLTYDKVEHKNSPAENAYDREDNHVITIGQPYTRGGESKASGQTYGESNTTASSGKTLSDAGSNIVSGGQIYTSESALPTGHLFSKGEDSTQWFGQTFTENNNNSMKPGYSYNNGESTIISFGGDNDDNRNASTKLLPSYGLLMDRASAQKSDVLSENEILKFNVDANATKITPLGVKSVCKRKDELKISKKVSSNNFPSNVRSLLSTGMLDGVPVTYIAWSREKELHGVIKGSGYLCGCQSCNLSKVINAYEFERHASCKTKHPNNHIYFENGKTIYGIVQELRSAPQNILFEVIQTITGSPINQKSFCAWKESFLGATRELQLIYGNS 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1652424 1655932 + Conep03aG0033000.1 Cone3ag0322 433781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0322 521 MobiDBLite consensus disorder prediction 225 251 - -
Cone3ag0322 521 PANTHER AUTOIMMUNE REGULATOR 2 509 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Cone3ag0322 521 Pfam Tify domain binding domain 420 474 IPR032308 -
Cone3ag0322 521 MobiDBLite consensus disorder prediction 221 251 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1303 Cone-Chr1:56307972 Cone3ag0322 Cone-Chr3:1652424 4.13E-74 wgd
Cone11ag1260 Cone-Chr11:9358001 Cone3ag0322 Cone-Chr3:1652424 7.79E-75 wgd
Cone18ag0330 Cone-Chr18:1649622 Cone3ag0322 Cone-Chr3:1652424 1.78E-71 wgd
Cone3ag0322 Cone-Chr3:1652424 Cone5ag0283 Cone-Chr5:1205653 1.76E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0322 - - - 0.0