Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0338 ATGGCGAGCCCTAGTCTTCGAGATCTGCTTGGCTGGAGAAAGTGGTCCAAGAAGGAGTGGGCGATTTCCGTCGTTGGCTTTACCGTCATCGTTTTCGTCTTCTCTCTCTTCACCGATTCTTTGCGCGACGATGATTCCGGCCTCGACCATCTCCCTTTCGGTTCCATTTCTTTCACTGATTTGGTTGACTTGACTCTATTGCGTAATGCTAAGGATAGAGGAGCACTTTGTTTGGATGGGAGCTCGCCTGGGTATCATTTGCAGAGAGGTTTTGGATCTGGTTCTAGTAACTGGCTGCTTCACATCGAGGGTGGTGGCTGGTGTAGTACAGTTGAATCATGTTCTTCACGTAAAATGACTCCGTTAGGTTCGTCAAATTACATGGATCGCCAGGTTCGTTTTTCCGGTATTCTCAGCAGTGATCCATCACAAAATCCTGAATTCTTCAACTGGAACAAAGTCAAGATACGTTATTGTGATGGAGGATCTTTTGCTGGCCACGCTGAGAGGGAGTTGGAAAATGGATCTAGACTTCTTTTCAGAGGCCAGTTCATATGGGAAGCCCTTATGGATGAAATCTTATCAGCTGGCTTGTCCAATGCAAAACAGGCTCTTCTTTCAGGATGCTCTGCTGGAGGACTGGCTACCCTTATACATTGTGATGATTTGAGAGAACTTCTTCCTAAAGATGCTACTGTCAAGTGCCTTGCTGATGCTGGATTTTTCCTCGATGAGAAAGATGTTGCTGGAAATTATACCATGAGATCTTTCTATCATGATGTTGTTGACCTTCAGGGTATAGCAAAAAGTTTGCAAAAAGCTTGTACAGCAAAGGAGGAGCCATATAAGTGTATCTTTCCTCAAGATATTGTCAAGCACACGCACACCCCACTATTCCTTGTCCACCCATCTTATGATTTTTGGCAGATACAACATATCTTGGTACCAGATACGTTAGATCCAATCGGCAATTGGAAGAAGTGTAGACTTGATCTTCGGAGCTGTAACCAGGGTCAGCTTGAAATTCTACACGGTTTCCGAAATTCCCTGCTGAAGACACTGAAAGACTTCAAGCAAGCCAAGGAAGGGGGAATGTTTATTAATTCCTGCTTCATTCATTGCCAAACATGGATGGGTGAGACATGGCATTCTCCTAGTTCTCCGAGAATAAATGGTCAGACAATAGCAGAGGCTGTAGGTGATTGGTTCTTCAACCGAAAATCAGTGAAGCTAATCGACTGCCCTTATCCATGCAATCCTACTTGCTACAATATGGATTTCACCCGAATTTAA 1293 44.32 MASPSLRDLLGWRKWSKKEWAISVVGFTVIVFVFSLFTDSLRDDDSGLDHLPFGSISFTDLVDLTLLRNAKDRGALCLDGSSPGYHLQRGFGSGSSNWLLHIEGGGWCSTVESCSSRKMTPLGSSNYMDRQVRFSGILSSDPSQNPEFFNWNKVKIRYCDGGSFAGHAERELENGSRLLFRGQFIWEALMDEILSAGLSNAKQALLSGCSAGGLATLIHCDDLRELLPKDATVKCLADAGFFLDEKDVAGNYTMRSFYHDVVDLQGIAKSLQKACTAKEEPYKCIFPQDIVKHTHTPLFLVHPSYDFWQIQHILVPDTLDPIGNWKKCRLDLRSCNQGQLEILHGFRNSLLKTLKDFKQAKEGGMFINSCFIHCQTWMGETWHSPSSPRINGQTIAEAVGDWFFNRKSVKLIDCPYPCNPTCYNMDFTRI 430
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1713273 1716194 + Conep03aG0034600.1 Cone3ag0338 433797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0338 430 Pfam Pectinacetylesterase 61 408 IPR004963 GO:0016787(InterPro)
Cone3ag0338 430 PANTHER NOTUM-RELATED 39 424 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1586 Cone-Chr1:57518332 Cone3ag0338 Cone-Chr3:1713273 2.66E-151 dispersed
Cone3ag0338 Cone-Chr3:1713273 Cone5ag0108 Cone-Chr5:497092 1.82E-149 dispersed
Cone10ag0309 Cone-Chr10:1465759 Cone3ag0338 Cone-Chr3:1713273 4.72E-110 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0338 K19882 - csv:101206380 655.595