Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0339 ATGGGAAACAGTTTTGGAAAAATCGGGAACTGCTTCGCCTTGCCCGGAGAAATCTCCAGCCGCTACGACGTTGCCGTAATCCTGTCGGACCCTTTCCACGAAGGTTTAGGTCATTCATTCTGCTACATCCGACCCGAACCGGCACGACTTTCATCTTCAACCTCGACCAGAGTTTTCTCCGAGCTAGAAGACGCTGCAACGACAACGTTCCGAACAATCTCCGGTGCCTCCGTCAGCGCCAACGCCTCCACTCCCCTCTCCACTTCTCTCGCCGACCTCTATCCCTACAGTACTACCTTCGATCGAGCCGCCGCTTTCGATTGCTCCAATTCCTTCGCTTCGATCCCTCTCCAACCCGTTCCTCGACATTCATTTTCCGGATACTCAGGAGGTACGATTCCAGGCTCGGGTCCGCTTGATAACAGAGGGTTCTTATCCGGCCCGTTCGAACGAGCCTTTGCTTCCGGCCCAATTGATCGCGGTTCATATTCCGGCCCGATTGAAAAGGGGACCTTCGACAAGTCCGACAAGTTACAGAGGAGCTTAACTAATAAACCCAAATCCAAAAAACGCAGCTTGATTCGGAATTTGAAAGGAGCGATTTCAAGAACCTTAACTCTAGGTAGTAAACCGATCGTTTTGAGTAAGGAATCGGATTCAGAGCATGTAGTTGTTCAGAACAGTGTCAATTTGAACAGCCACGTCAGCTTCGCTGAGAATGAAGAACTAGGTCTTCAATGGGCGCAAGGAAAAGCTGGGGAAGACAGAATTCACGTCGTGATCTCAGAGGAAAATGGTTGGGTTTTTGTTGGGATTTATGATGGATTCAACGGCCCAGATGCTCCTGATTATCTACTTGCCAATCTCTATTCCTCTGTTCACAAAGAGCTCAAGGATTTACTCTGGAACGATAAATCCGATTCGACCACTACTACTTGCTCGACCAATTCCTCTAATTCGAATTCCACGCAAGAATCCGTTCGAACCCTGACGAGGAAAGGGAGTGAGAAGATTTGGAAGTGTGAATGCGAAAGGGAAAGTAGTTCGTTAAGTAATTCGGAAGTATTGAACGCTCTGTCTCGAGCGTTGGCGAAAACAGAGGAAGCATATTTAGAGAGTGCAGATAAAATGGTTATGGATAATCCAGAGCTGGCTTTGATGGGTTCCTGTGTTTTGGTGATGTTAATGAAAGGAGAAGATGTTTATTTAATGAATGTAGGAGATAGTCGGGCCATTCTGGCCCAACAACTCGAACCCAATTATGGGCTCGGAAGGCCTTACAGAGATCATGAACAGATCAATGAAGGAAGTCTCCGGGCATACGAATCGTCGAACGGAGTTGAATTCTATGGATTGGCTAACTTGACTTCCGCTCAACTTACTATTGATCATAGCACAAATGTAGAAGAGGAAGTGCAGAGAATTAAGAATGAACATGAGGATGACTCTTCTGCAGTAATGAATGATAGAGTAAAGGGCTATCTGAAAATCACCCGAGCTTTTGGGGCTGGTTTTCTCAAACAGCCAAAATGGAACGATGCACTACTAGAAATGTTCAGAATAGACTATGTGGGGACCTCTCCTTATATCACCTGTAATCCATCTCTCTTTCACCATAAACTGGGTCCCACCGATCGGTTTTTGATACTATCGTCCGACGGGCTCTACCAATACTTCACAAATGAGGAAGCAGTTGCCGAAGTGGAGTCCTTCATCTCTTCATTTCCAGAAGGGGATCCTGCTCAGCATCTGATTGAGGAGTTGCTGTTTAGAGCAGCAAGGAAAGCTGGTATCGACTTCCATGAGTTGCTGGATATCCCGCAAGGGGAACGACGGAGGTACCACGATGATGTCTCCGTCATCATTATCTCACTTGAAGGAAGAATATGGCGTTCATTTGTGTAA 1905 46.72 MGNSFGKIGNCFALPGEISSRYDVAVILSDPFHEGLGHSFCYIRPEPARLSSSTSTRVFSELEDAATTTFRTISGASVSANASTPLSTSLADLYPYSTTFDRAAAFDCSNSFASIPLQPVPRHSFSGYSGGTIPGSGPLDNRGFLSGPFERAFASGPIDRGSYSGPIEKGTFDKSDKLQRSLTNKPKSKKRSLIRNLKGAISRTLTLGSKPIVLSKESDSEHVVVQNSVNLNSHVSFAENEELGLQWAQGKAGEDRIHVVISEENGWVFVGIYDGFNGPDAPDYLLANLYSSVHKELKDLLWNDKSDSTTTTCSTNSSNSNSTQESVRTLTRKGSEKIWKCECERESSSLSNSEVLNALSRALAKTEEAYLESADKMVMDNPELALMGSCVLVMLMKGEDVYLMNVGDSRAILAQQLEPNYGLGRPYRDHEQINEGSLRAYESSNGVEFYGLANLTSAQLTIDHSTNVEEEVQRIKNEHEDDSSAVMNDRVKGYLKITRAFGAGFLKQPKWNDALLEMFRIDYVGTSPYITCNPSLFHHKLGPTDRFLILSSDGLYQYFTNEEAVAEVESFISSFPEGDPAQHLIEELLFRAARKAGIDFHELLDIPQGERRRYHDDVSVIIISLEGRIWRSFV 634
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1717551 1719768 - Conep03aG0034700.1 Cone3ag0339 433798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0339 634 CDD PP2Cc 251 625 IPR001932 -
Cone3ag0339 634 Pfam Protein phosphatase 2C 456 576 IPR001932 -
Cone3ag0339 634 Pfam Protein phosphatase 2C 328 416 IPR001932 -
Cone3ag0339 634 MobiDBLite consensus disorder prediction 306 329 - -
Cone3ag0339 634 Gene3D - 219 630 IPR036457 -
Cone3ag0339 634 ProSiteProfiles PPM-type phosphatase domain profile. 234 625 IPR001932 -
Cone3ag0339 634 FunFam Protein phosphatase 2C 29 223 632 - -
Cone3ag0339 634 SUPERFAMILY PP2C-like 251 626 IPR036457 -
Cone3ag0339 634 PANTHER PROTEIN PHOSPHATASE 2C 220 625 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone3ag0339 634 SMART PP2C_4 238 623 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0339 Cone-Chr3:1717551 Cone8ag0618 Cone-Chr8:6075605 2.30E-140 dispersed
Cone1ag0643 Cone-Chr1:6164102 Cone3ag0339 Cone-Chr3:1717551 1.83E-217 wgd
Cone3ag0339 Cone-Chr3:1717551 Cone5ag1149 Cone-Chr5:5179324 9.28E-224 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0339 - - - 0.0