Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0347 ATGTTTGATATTGTACTGTTTTGTAGCACTGGAAAAGGGCTGGAGCGATTGACTAGTCTTGGTTCAAAGTTGAAGAGTGCAAAAAACAAAAAACCCATTTTGGAGAGCCGCCAACAATTACGAGGATCTAATGGAAGAAAGAATCGCGGGAAGAAACGAAATGGAAAAAAAGGAAGTAGTGGATCTGTGAACTCTCTTGATTACTTGTGCACAAGCTGTTTGCAGCTGATGATTGCAAGAATGCAAATGAACTTCAAAGGCAAATCAGGCAGCACTCTTCTCCCATTGGAGATGGAAATCAGAGATTGGCTCAAGGCTGGATTCCAAGGGCCCACCCTTGTACAACGGCTCTCATGGAAATCAGGCGGACCTCCAAGGTTGAAGATCACCGGAATAGAGTTTCCCCAACAGGGTTTCCGGCCTGCAGAAAGACTTGAGGCAACAGGGCGGTGCTTAGCAACCTATGCTGAGACTTTCAAAGTACCTTTTGAGTACCTTGCTGTTGCTAAAAAAATGGAAACTATTCAGCTTGAGGATCCTAAGATAGACAAGGATGAAGTTTTAGGTGTTAACTGTCTTCATCGAGGTAAGAATGTGCTTGATGAGAGTGTGGCTGTGGACAGTCCAAGAAAGATGTTTCTTGATTTGGTACGGAAAATTAATCTGGAGGCGCTGTTTCACTTCGGTGCCATGTTTGATATGCTTGAGATTGTAGTGCCTCATGAGGATCAGGAGAGAATGCTGATCGAGAAAGAAATATTAGGTAGGGAGGCGCTGCATGTGATAGAATGTGAAGGGTCAGAGAGAGTGGAAAGACCAGAGACATACAAGCAGTGGCAAGTCCGTATAATGAGGGCTGGATACCTTTTGACAGGGATATTGTGTAGATGGGACGGGCTAAAGTGA 906 44.48 MFDIVLFCSTGKGLERLTSLGSKLKSAKNKKPILESRQQLRGSNGRKNRGKKRNGKKGSSGSVNSLDYLCTSCLQLMIARMQMNFKGKSGSTLLPLEMEIRDWLKAGFQGPTLVQRLSWKSGGPPRLKITGIEFPQQGFRPAERLEATGRCLATYAETFKVPFEYLAVAKKMETIQLEDPKIDKDEVLGVNCLHRGKNVLDESVAVDSPRKMFLDLVRKINLEALFHFGAMFDMLEIVVPHEDQERMLIEKEILGREALHVIECEGSERVERPETYKQWQVRIMRAGYLLTGILCRWDGLK 301
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 1765685 1766882 + Conep03aG0035600.1 Cone3ag0347 433806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0347 301 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 105 288 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cone3ag0347 301 ProSiteProfiles GRAS family profile. 1 301 IPR005202 -
Cone3ag0347 301 MobiDBLite consensus disorder prediction 28 61 - -
Cone3ag0347 301 Pfam GRAS domain family 223 288 IPR005202 -
Cone3ag0347 301 Pfam GRAS domain family 105 221 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0347 Cone-Chr3:1765685 Cone4ag1048 Cone-Chr4:9129371 5.79E-64 dispersed
Cone3ag0347 Cone-Chr3:1765685 Cone7ag1079 Cone-Chr7:8200464 4.48E-54 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45783 PF00249 Myb_DNA-binding 5.70E-07 CL0123 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0347 K27753 - mdm:103413778 265.774