Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0419 | ATGGCTGCCGCCACCACCACTACCGCCGCTACATCCTCTTTCATCGGAACCCGTCTTCCCGATGTCCGCTCAAGCTCGGGCAGAATCCAAGCCCGATTCGGTTTCGGACGCAAGAAAGGCCCAGCTCCCAGGAAAGCATCAAAGCCCACTACAGACCGCCCTCTCTGGTACCCAGGAGCTAAAGCACCCGAATGGCTTGACGGAAGCTTGGTAGGTGATTACGGGTTCGACCCATTTGGTTTGGGTAAGCCCGCAGAGTACCTTCAGTTCGACTTGGACTCTTTGGACCAGAACTTGGCTAAAAACTTGGCCGGTGATGTGATTGGAACCCGGTTCGAGAACGCGGAAGTAAAGTCCACTCCCTTCCAGCCTTACACTGAGGTTTTTGGTCTGCAGAGATTCCGTGAATGCGAGCTCATCCATGGAAGATGGGCCATGCTGGCCACTCTTGGTGCCCTCACCGTTGAATGGCTCACCGGCATCACCTGGCAAGATGCTGGAAAGGTAGAGCTAGTGGAAGGGTCATCATACCTTGGTCAACCTCTTCCATTCTCTATTACGACATTGATCTGGATCGAAGTCTTGGTGATCGGATACATTGAGTTTCAGAGAAATGCAGAGTTGGACCCAGAGAAGAGGTTGTACCCTGGCGGGAACTTCTTCGACCCCTTGGGTTTGGCTGCGGATCCAGAGAAGAAGGCGATCCTCCAATTGGCGGAAATCAAGCACGCCCGTCTTGCCATGGTGGCTTTCTTGGGCTTTTCTGTTCAAGCTGCCGCCACTGGCAAAGGCCCACTTAACAACTGGGCTACCCATTTGAGCGATCCACTCCACACCACCATCATTGACACATTTACTTCATCCTCTTAA | 870 | 53.22 | MAAATTTTAATSSFIGTRLPDVRSSSGRIQARFGFGRKKGPAPRKASKPTTDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRFENAEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGNFFDPLGLAADPEKKAILQLAEIKHARLAMVAFLGFSVQAAATGKGPLNNWATHLSDPLHTTIIDTFTSSS | 289 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2060046 | 2061020 | - | Conep03aG0043200.1 | Cone3ag0419 | 433878 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0419 | 289 | MobiDBLite | consensus disorder prediction | 33 | 54 | - | - | |
Cone3ag0419 | 289 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 10 | 283 | IPR001344 | GO:0009416(PANTHER)|GO:0009535(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0009941(PANTHER)|GO:0010287(PANTHER)|GO:0016020(InterPro) | |
Cone3ag0419 | 289 | Gene3D | Chlorophyll a/b binding protein domain | 56 | 289 | - | - | |
Cone3ag0419 | 289 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 103 | 287 | - | - | |
Cone3ag0419 | 289 | Pfam | Chlorophyll A-B binding protein | 62 | 258 | IPR022796 | - | |
Cone3ag0419 | 289 | SUPERFAMILY | Chlorophyll a-b binding protein | 45 | 287 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0419 | Cone-Chr3:2060046 | Cone5ag0333 | Cone-Chr5:1408962 | 2.26E-40 | dispersed | |
Cone1ag1220 | Cone-Chr1:55986365 | Cone3ag0419 | Cone-Chr3:2060046 | 3.96E-141 | wgd | |
Cone10ag0383 | Cone-Chr10:1812105 | Cone3ag0419 | Cone-Chr3:2060046 | 2.63E-203 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0419 | K08915 | - | mtr:11422473 | 522.702 |