Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0465 ATGGCTACTTTTATCATACGTTTTTCCTTATTACTTCTAGTACTTGTTAATATTAGACCAACCTCAGCTCAGTTGTCTTCTACCTTTTACTCCACCTCATGTCCTAGAGCTGTTGCCACCATCAAATCCGCCATTAACTCTGCCGTCTCAAAAGAGCCGCGCATGGGAGCTTCCTTGCTCCGCCTTCATTTCCACGATTGCTTTGTTAATGGATGTGATGCTTCCATATTGTTGGACGACACGTCGAATTTCACGGGAGAGCAAACGGCGGGTCCGAATGCAAACTCGGTGAGAGGATATGAAGTAATCGATTCAATCAAAGCGCAGCTCGAGAGTATATGTCCAGGGGTCGTTTCTTGTGCTGACATCATAACAGTAGCAGCAAGAGACTCCACCGTAGCATTGGGTGGACCAAGTTGGGTAGTACCACTGGGTAGAAGAGACTCGACCACTGCAAGCTTAAGCACTGCGAATAGCGACCTCCCTGGCCCTGATTCGTCTCTAAGTTCCCTCATCACTTCTTTCTCAAACAAAGGTTTTACTGTTAAAGAAATGGTCGCTCTCTCAGGATCGCACACCATCGGACAGGCGCGGTGCGCAACGTTCCAGAGAAGACTGTACAACGATGCCAACATAAACGCTTCTTATGCGACAACTTTGAAAATAAATTGCCCAAGCTCTGGAGGTGACGCCAACTTATCACCTCTCGACGTAACCAGTCCAAAATCATTCGACAACGCATATTTCAAGAACTTGTTGACTCAGAAGGGCCTCTTGCACTCTGATCAGGAACTCTTCAACGGCGGCTCCACCGACTCCCAAGTCAACGCTTATAGCACCAACTTAGCGAGTTTCCGAACAGATTTCGCCAACGCCATGGTTAAGATGGGAAATCTTAGTCCACTTACGGGAACAAGTGGTCAGATTAGGACCAATTGTGGAAAGACCAATTGA 954 47.17 MATFIIRFSLLLLVLVNIRPTSAQLSSTFYSTSCPRAVATIKSAINSAVSKEPRMGASLLRLHFHDCFVNGCDASILLDDTSNFTGEQTAGPNANSVRGYEVIDSIKAQLESICPGVVSCADIITVAARDSTVALGGPSWVVPLGRRDSTTASLSTANSDLPGPDSSLSSLITSFSNKGFTVKEMVALSGSHTIGQARCATFQRRLYNDANINASYATTLKINCPSSGGDANLSPLDVTSPKSFDNAYFKNLLTQKGLLHSDQELFNGGSTDSQVNAYSTNLASFRTDFANAMVKMGNLSPLTGTSGQIRTNCGKTN 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2252239 2253746 + Conep03aG0048000.1 Cone3ag0465 433924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0465 317 Gene3D - 28 313 - -
Cone3ag0465 317 FunFam Peroxidase 28 168 - -
Cone3ag0465 317 CDD secretory_peroxidase 24 316 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone3ag0465 317 SUPERFAMILY Heme-dependent peroxidases 24 317 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 ProSiteProfiles Plant heme peroxidase family profile. 24 317 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 FunFam Peroxidase 162 296 - -
Cone3ag0465 317 Gene3D Peroxidase, domain 2 162 296 - -
Cone3ag0465 317 Pfam Peroxidase 42 281 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Cone3ag0465 317 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Cone3ag0465 317 PANTHER PEROXIDASE 72-RELATED 11 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone3ag0465 317 PRINTS Plant peroxidase signature 291 304 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1380 Cone-Chr19:9120645 Cone3ag0465 Cone-Chr3:2252239 6.48E-178 dispersed
Cone3ag0465 Cone-Chr3:2252239 Cone5ag1048 Cone-Chr5:4588404 2.69E-132 dispersed
Cone1ag1631 Cone-Chr1:57676451 Cone3ag0465 Cone-Chr3:2252239 5.49E-136 wgd
Cone10ag0434 Cone-Chr10:2017359 Cone3ag0465 Cone-Chr3:2252239 1.91E-194 wgd
Cone3ag0465 Cone-Chr3:2252239 Cone5ag0153 Cone-Chr5:650032 7.10E-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0465 K00430 - mdm:103433738 481.1