Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0468 | ATGGAGAACAAAGGGAGTATTTTGATGGATCGCTATGAATTAGGAAGGTTGCTAGGCCAGGGAACCTTTGCTAAGGTTTACTATGCAAAAAACGTCGAAACTGGCATGACTGTGGCCATTAAGGTCATCGACAAAGAGAAGATCCTGAAGGTTGGATTGATTGATCAGATTAAGAGAGAAATTTTTGTGATGAGACTGGTTCGGCATCCTAATGTGGTGGAGCTTTATGAGGTGATGGCCAGCAAAACCAAGATTTACGTTGTCATGGAGTATGTTAAAGGGGGTGAGCTATTCAACAAGGTAGCCAAAGGAAAGCTCAAGGAAGCTGCTGCGAGGAAGTATTTCCAGCAACTGATCAGCGCTGTTGATTACTGTCACAGTAGGGGGGTCTATCATCGGGATTTAAAACCAGAGAACCTACTGTTAGATGAGCATGGTAATCTAAAGGTTTCTGATTTTGGGTTGAGTGCCTTTGCTGAATCTAAACGCCAGGATGGACTGCTCCATACAACATGTGGGACCCCTGCCTATGTTGCTCCGGAAGTGATTAACAGAAGAGGCTATGATGGATCGAAAGCTGATATTTGGTCATGTGGGGTGATCCTATTTGTTCTTCTGGCAGGTTATCTTCCATTCAATGACCCAAATTTGATGGAAATGTATAGGAAGATTGGTAAGGCGGAATTTACATTTCCTAACTGGTTCACGCCGGAGGTGCGCAGGTTGCTGTCAAAAATATTGGATCCCAACCCAAACACCAGGATATCTATGGCTCAGATAATGGAAAGTTCTTGGTTCAGAAAGGGTTTACACCCTAAACCTCAACTTAATGCGACAGAAGGGAAAGAAATAGTCCCTTTTGATGCCAATGCATCATTTGAGCTTAACGAGAATAGCAGTGCTCTTGGAGAGGGGAAGCAAGAGTCGGCAAGGCCATCTAATTTGAATGCTTTTGAAATTATATCCTTTTCTGCAGGATTTGACCTGTCTGGTTTGTTCGAGGAGACTCAGAAAAAGAGAAAAGTACGATTCACATCCAACAAGAGTGCCTCCACTATCATCTCCAGGCTGGAAGAAATCGCAAAGCGTTTAAGATTAAAGGTGAAAAAGAAAGATGGCGGGTTGTTAAAAATCGAAGGGTCCAAGGAAGGGCGAAAAGGAGCCTTAGCCATTGATGCAGAGCTATTTGAGATCACCCCATTATGCCATGTGGTGGAAATGAAGAAGTCGAATGGAGATACATTGGAATATCAGAAGATAATGGGCGAGGAGATTCGACCAGCTCTCAAAGACATTGTTTGGGCTTGGCAAGGGGAGCAAAGCCAGGAACAAGTACCGGTTATAGAAGAGCAAGTACAAACATTAGCAGCCACCTCACGCACTACTGCCTATGTAGATCAAATGCCTGTCTGA | 1413 | 43.88 | MENKGSILMDRYELGRLLGQGTFAKVYYAKNVETGMTVAIKVIDKEKILKVGLIDQIKREIFVMRLVRHPNVVELYEVMASKTKIYVVMEYVKGGELFNKVAKGKLKEAAARKYFQQLISAVDYCHSRGVYHRDLKPENLLLDEHGNLKVSDFGLSAFAESKRQDGLLHTTCGTPAYVAPEVINRRGYDGSKADIWSCGVILFVLLAGYLPFNDPNLMEMYRKIGKAEFTFPNWFTPEVRRLLSKILDPNPNTRISMAQIMESSWFRKGLHPKPQLNATEGKEIVPFDANASFELNENSSALGEGKQESARPSNLNAFEIISFSAGFDLSGLFEETQKKRKVRFTSNKSASTIISRLEEIAKRLRLKVKKKDGGLLKIEGSKEGRKGALAIDAELFEITPLCHVVEMKKSNGDTLEYQKIMGEEIRPALKDIVWAWQGEQSQEQVPVIEEQVQTLAATSRTTAYVDQMPV | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2270645 | 2273110 | + | Conep03aG0048300.1 | Cone3ag0468 | 433927 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0468 | 470 | ProSiteProfiles | Protein kinase domain profile. | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0468 | 470 | Gene3D | Transferase(Phosphotransferase) domain 1 | 92 | 271 | - | - | |
Cone3ag0468 | 470 | ProSitePatterns | Protein kinases ATP-binding region signature. | 18 | 41 | IPR017441 | GO:0005524(InterPro) | |
Cone3ag0468 | 470 | Gene3D | Kinase associated domain 1, KA1 | 310 | 435 | - | - | |
Cone3ag0468 | 470 | FunFam | Non-specific serine/threonine protein kinase | 310 | 434 | - | - | |
Cone3ag0468 | 470 | Gene3D | Phosphorylase Kinase; domain 1 | 2 | 91 | - | - | |
Cone3ag0468 | 470 | Pfam | Protein kinase domain | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0468 | 470 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 130 | 142 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone3ag0468 | 470 | Pfam | NAF domain | 312 | 370 | IPR004041 | GO:0007165(InterPro) | |
Cone3ag0468 | 470 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 275 | IPR011009 | - | |
Cone3ag0468 | 470 | PANTHER | CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED | 4 | 427 | - | GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cone3ag0468 | 470 | FunFam | Non-specific serine/threonine protein kinase | 3 | 91 | - | - | |
Cone3ag0468 | 470 | ProSiteProfiles | NAF domain profile. | 310 | 334 | IPR018451 | GO:0007165(InterPro) | |
Cone3ag0468 | 470 | SMART | serkin_6 | 12 | 266 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0468 | 470 | FunFam | Non-specific serine/threonine protein kinase | 2 | 289 | - | - | |
Cone3ag0468 | 470 | CDD | STKc_SnRK3 | 11 | 265 | - | - | |
Cone3ag0468 | 470 | CDD | CIPK_C | 316 | 430 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone16ag0422 | Cone-Chr16:6591522 | Cone3ag0468 | Cone-Chr3:2270645 | 2.49E-179 | dispersed | |
Cone20ag0325 | Cone-Chr20:1450077 | Cone3ag0468 | Cone-Chr3:2270645 | 9.41E-175 | dispersed | |
Cone2ag0573 | Cone-Chr2:3318429 | Cone3ag0468 | Cone-Chr3:2270645 | 1.73E-184 | dispersed | |
Cone3ag0468 | Cone-Chr3:2270645 | Cone5ag1047 | Cone-Chr5:4584453 | 1.14E-218 | dispersed | |
Cone3ag0468 | Cone-Chr3:2270645 | Cone3ag0471 | Cone-Chr3:2291342 | 7.63E-133 | proximal | |
Cone10ag0437 | Cone-Chr10:2031148 | Cone3ag0468 | Cone-Chr3:2270645 | 2.05E-303 | wgd | |
Cone19ag1441 | Cone-Chr19:9385129 | Cone3ag0468 | Cone-Chr3:2270645 | 1.52E-138 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82658 | None | None | None | None | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0468 | K07198 | - | cit:102619997 | 718.383 |