Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0471 ATGGCGGATCAGGAGAGTGATCTCGGTGACAGGAGTGAGGAGAGGATCGGCGATGAATCTCAGAGGGAAGTTATTTTGTTCGGAAAGTACGAGCTTGGGAAATTGTTAGGTTACGGCGCTTTCGCAAAGGTGTACCATGCGAGAGATATCAGTACGGGGCAAAGTGTGGCGGTAAAGGCCGTGAGCAAGAAGAAGGTTTTGAAAGGTGGATTGACCGGAAACATTAAGAGAGAGGTGACCATCATGAGCCGACTCCACCATCCTCACGTCGTCCGCCTCATCGAGGTTTTGGCCAGCATAACGAAGATCTACTTCGTCATGGAGTTCGCTAAAGGCGGCGAGCTTTTCGCCAAGATTTCCAAGGGACGATTTAGCGAAGATCTAAGCCGTTGTTACTTCCAGCAGCTTATCACCGCCGTTAGATATTGTCATTCAAGAGGCATCTTCCATCGCGATTTGAAGCCGGAGAATCTCCTTCTCGATGAGAATTGGAACCTGAAAGTGACGGATTTTGGTCTTAGTGCCGTCAAAGACCAGGTTCAACCCGACGGCTTGCTCCACACTCTATGCGGAACGCCGGCTTACGTGGCCCCGGAGATTCTGGCAAAGAAAGGTTACGACGGTGCGAAGGTGGACGTGTGGTCATGCGGCATCACGCTTTACGTGCTCAGTGCTGGCTACTTACCGTTCAACGACACAAATCTAATGGTCATGTACCGGAAGATTTACAAGGGAGAGTTCCGTTTCCCCAAATGGACGTCTCCTGATCTCCGGCACTTAATCAAGCGCCTTCTCGACACAAATCCCGAGACTCGAATCTCCGTCGATGAGATTCTATGCGATCCGTGGTTCAGAAAAGGATACAGAGCGACTGACATTCATCCGGACGATTCTGAGCTCTTGAAATGCTCCAGCAACAAATTAGACAACGCCAAGAGCATGAACGCCTTCGATTTGATTTCCTTCTCTTCCGGTTTAGATTTGAACCCTTTGATCAGCAACTTGGAAACTTCGTCCAGCGACGAACGGTTCCTGTCGGCCGAGACACCAGAACGGATCATGGAGAAGGTGGACGCCGTTGCAAAAACAGAAAACGTTACGGTGCTGGCGAAGAATGGGTGGGGAGCAAAATTAGAGGGAGTAAATGGTAATTTCCAAGTGGTTGTTAATATTTACCGGTTCACTGAGAAATTAGTTATGGTGGAATTTAAGGAGAGCGCGATTCACGGGGGTGAAACTCAACAGATTTGGAAAGATAAACTGAGACCACAACTCAATTGTTTAATTTATCAATGA 1296 48.53 MADQESDLGDRSEERIGDESQREVILFGKYELGKLLGYGAFAKVYHARDISTGQSVAVKAVSKKKVLKGGLTGNIKREVTIMSRLHHPHVVRLIEVLASITKIYFVMEFAKGGELFAKISKGRFSEDLSRCYFQQLITAVRYCHSRGIFHRDLKPENLLLDENWNLKVTDFGLSAVKDQVQPDGLLHTLCGTPAYVAPEILAKKGYDGAKVDVWSCGITLYVLSAGYLPFNDTNLMVMYRKIYKGEFRFPKWTSPDLRHLIKRLLDTNPETRISVDEILCDPWFRKGYRATDIHPDDSELLKCSSNKLDNAKSMNAFDLISFSSGLDLNPLISNLETSSSDERFLSAETPERIMEKVDAVAKTENVTVLAKNGWGAKLEGVNGNFQVVVNIYRFTEKLVMVEFKESAIHGGETQQIWKDKLRPQLNCLIYQ 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2291342 2292875 - Conep03aG0048600.1 Cone3ag0471 433930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0471 431 FunFam Non-specific serine/threonine protein kinase 20 314 - -
Cone3ag0471 431 SUPERFAMILY Protein kinase-like (PK-like) 26 298 IPR011009 -
Cone3ag0471 431 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165(InterPro)
Cone3ag0471 431 ProSitePatterns Protein kinases ATP-binding region signature. 36 59 IPR017441 GO:0005524(InterPro)
Cone3ag0471 431 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0471 431 CDD CIPK_C 315 426 - -
Cone3ag0471 431 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 20 409 - GO:0004674(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Cone3ag0471 431 FunFam Aurora kinase A 22 113 - -
Cone3ag0471 431 Gene3D Phosphorylase Kinase; domain 1 19 109 - -
Cone3ag0471 431 ProSiteProfiles Protein kinase domain profile. 30 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0471 431 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Cone3ag0471 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0471 431 Gene3D Kinase associated domain 1, KA1 310 431 - -
Cone3ag0471 431 SMART serkin_6 30 284 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0471 431 Pfam NAF domain 312 368 IPR004041 GO:0007165(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag1441 Cone-Chr19:9385129 Cone3ag0471 Cone-Chr3:2291342 4.40E-212 dispersed
Cone3ag0471 Cone-Chr3:2291342 Cone5ag1046 Cone-Chr5:4578612 4.12E-174 dispersed
Cone3ag0468 Cone-Chr3:2270645 Cone3ag0471 Cone-Chr3:2291342 7.63E-133 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82659 PF14541 TAXi_C 4.60E-35 CL0129 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0471 - - - 0.0