Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0473 ATGAGTTGCAGCGAGAATAACCGAGGAAGAGAAGAGAGGGAACAGGAGCAGCTCGTTCTAAGCCGATCTAATGAGTTTAATCCAGAATCTGTCACGGATAATGGGTCCATTACCTCACACCAGCTGACCATCGACGAGAATCGGCTGGTCGACCCTAAATTGTTGTTTATTGGATCAAAAATTGGCGAGGGAGCTCATGGAAAAGTTTACCAAGGAAGGTATCGGGATCGTATTGTTGCTATCAAAGTTCTTCATCGTGGGAGTACTACTGAAGAACGAGCTACACTTGAGAAACGTTTTGCCCGGGAAGTTAATATGATGTGCCGAGTTAAACATGAGAATCTTGTCAAGTTTATTGGAGCTTGTAAAGATCCTTTAATGGTGATAGTGACAGAGCTATTGCCTGGGATGTCCCTCCGGAAGTATCTACTTAGTATACGCCCAAATCAATTAGAACTTCACGTGGCTGTAAACTTTGCTTTGGATGTCGCTCGTGCTATGGAATGTCTACATGCCAATGGGATCATACATAGAGATCTCAAACCTGACAATTTGCTGCTCACAGCAAATCAGAAGTCCGTGAAGCTTGCAGACTTTGGTCTTGCAAGAGAAGAATCTGTGACCGAGATGATGACAGCTGAAACTGGGACTTATCGTTGGATGGCTCCTGAGTTGTACAGCACTGTGACATTGCGTCAGGGGGAGAAGAAGCATTACAATAACAAAGTTGATGTGTACAGCTTTGGAATTGTCTTATGGGAACTCTTGACCAACCGAATGCCCTTTGATGGCATGTCGAATTTGCAGGCCGCATATGCTGCTGCTTTTAAGCAAGAAAGGCCTAGTCTACCGGAGGACATATCTCCTGATTTGGCATTCGTAATTCAGTCTTGCTGGGTAGAGGATCCAAACATGAGGCCAAGCTTCAGTCAGATTATCCGGATGCTCAATGCATTTCTGTTTACACTATCCCCAGCTTTGACGTCTTTTCCGGAAAGTAACGCGGCCGAGGTGGCGGCGACTAGTAACGGTACCATTACTGTGCTTTCTGGTCGTGGAAGAGGGAAGTTTGGTTTTCTACGCCAACTGTTTGCTGCCAAGAGGACCAAGAACTGA 1116 45.61 MSCSENNRGREEREQEQLVLSRSNEFNPESVTDNGSITSHQLTIDENRLVDPKLLFIGSKIGEGAHGKVYQGRYRDRIVAIKVLHRGSTTEERATLEKRFAREVNMMCRVKHENLVKFIGACKDPLMVIVTELLPGMSLRKYLLSIRPNQLELHVAVNFALDVARAMECLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFDGMSNLQAAYAAAFKQERPSLPEDISPDLAFVIQSCWVEDPNMRPSFSQIIRMLNAFLFTLSPALTSFPESNAAEVAATSNGTITVLSGRGRGKFGFLRQLFAAKRTKN 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2302328 2305346 + Conep03aG0048800.1 Cone3ag0473 433932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0473 371 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Cone3ag0473 371 FunFam Kinase suppressor of Ras 1 44 134 - -
Cone3ag0473 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 MobiDBLite consensus disorder prediction 1 19 - -
Cone3ag0473 371 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 MobiDBLite consensus disorder prediction 20 38 - -
Cone3ag0473 371 PANTHER SERINE-THREONINE PROTEIN KINASE 32 317 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone3ag0473 371 SUPERFAMILY Protein kinase-like (PK-like) 55 332 IPR011009 -
Cone3ag0473 371 Gene3D Transferase(Phosphotransferase) domain 1 138 341 - -
Cone3ag0473 371 MobiDBLite consensus disorder prediction 1 38 - -
Cone3ag0473 371 CDD STKc_MAP3K-like 61 316 - -
Cone3ag0473 371 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 FunFam serine/threonine-protein kinase HT1 136 336 - -
Cone3ag0473 371 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524(InterPro)
Cone3ag0473 371 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0473 371 SMART serkin_6 55 320 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0095 Cone-Chr11:406377 Cone3ag0473 Cone-Chr3:2302328 1.31E-100 dispersed
Cone18ag1380 Cone-Chr18:9463826 Cone3ag0473 Cone-Chr3:2302328 2.82E-141 dispersed
Cone3ag0473 Cone-Chr3:2302328 Cone6ag1606 Cone-Chr6:12440854 4.76E-87 dispersed
Cone10ag0440 Cone-Chr10:2045302 Cone3ag0473 Cone-Chr3:2302328 1.37E-198 wgd
Cone13ag1446 Cone-Chr13:10362427 Cone3ag0473 Cone-Chr3:2302328 3.51E-81 wgd
Cone19ag1445 Cone-Chr19:9410125 Cone3ag0473 Cone-Chr3:2302328 8.36E-216 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82660 PF08609 Fes1 2.80E-05 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0473 - - - 0.0