Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0482 ATGTCTGATTGTCTTCCTTCAACCACTTTCACTCTTTCCCTCCCCCAATTTCGACATTTAGGATTTTCCAGATGCAACTGGGTTCCCAGTCGTCCAAAGCTACCTAGTTCCACCAAATCGTACGTCACGGCTGTTGATAACTGCCGGTCTCAGTCTGTGATCCTCAGAGGTACGTTCTTTAAGTGCTGCTCCTCGAGCGCCTTTGAATCAGAGAAGGATGAGTTTCGTCATGAATTAGGACTCAAGGAGAAAGGAGATAGTCTTTTGGACTTGGAATCAAGTTACATCGATTCAGTTACAAGGCATAACACCGTCGCTTCCAGTAAAGGTAAGAAGCGGGACAGTCACAGCGGTACTGCAGCATCTTCGTCGACACTGGATTTCATCGAGCGGAATGGTAGGACAGAGGGTGAGTACAAGGATAGGAAGCTTGAAGAAAAGGGGAAAGGGGAATCAGATTGGCGTAAGGGAAGTGCGGGGTTGATGAAACGGAGGCAAGTAATGAAGAGGTCGAGTCTAGTGGCAAAACAAGTAATCAGCATTCAGAGTGCTCTAAGTCTCGGCTTTGTCTCGCAGCTTTGGGTTGACACCACCGCTTGGATGGTATTATATGTAGAAGTGAGGCCAAACTTGCTTTCTGGAGAATCAGAATGGCTTCTTCTCGAGGATGTTAGCCAGGTGGGTGATGTTGTACTGGTACAGGATGAGACTTTAATGGAGAATGAATTCAGAATGGCTGGACTGGAAACATTGGTAGGAAACAAAGTTGTGACACCGGCCCGACGGAACATCGGAAAGGTAAGGGGATACACTTTCAATATTAACTCGGGGGCTGTTGAATCGCTTGAGCTCGATTCATTTGGGATTTCTATTATTCCATCAACCCTGGTGAGTACCTATGCTTTGCTTGTTGAGGATGTGCTTGAAGTTGTATGTGATGCAGTAGTCGTGCATGAAGCTGCAGCATCACGCATTCAGAGGCTAACAAAGAGTGAAAGGCAGACGCTTGACAACGACCCCCGTCGAACGAGCAAGCAAGCGATCAAAATGGCCACTGTTCTGTCTCAGGTCTCTGGATCTCAGCACCATCTCCGCCCCAAAGCTGGCCGGATACCTCTCCAGCCAATAAATTCCTCATGTACGCCTCTAGGAACAGAGAACTGCATCAGGGGTAAGCAGGATGAGGGAATCCGATCGTTGCTTTTGGGAGAATCGAATAAGGAGAACCGTCCGATATACGCAGAAAATGAGGCTCCTACAAAGATAGAGATGCTGGATGCATCACTTGGGGAGGAGCTGAGTGCGATTAAGAAGAAGCTAGAGAGACTGACGCTTGACAGAGAGAAAACGGACAAGTTGTTGAAAGAGAGGGAGCTAGTGTTGGAGTTGCAGAGGAAGGACCTGCATGAGAGAGGTCAGTTTCAGAAGGCGCTGGAGATGGAGGTTGATAAGCTCTACCGCTTGAAGGAACTCAGATCTTACTGCACGAGAGTGTCTCCGATTCGATCTCTGAGAGAAAAGGAACAAGGAAACAGGGTTCATGGAGGACAAGGAAACAAGGAAACGAATAAGATCGATAGTGCAGCAGCAGAGTCCGGGGATGAAAGCAGCACATCAAACAGCCTGGGTGGGTCGGGTCTTGGGACTATGCGCTTGCAAGCTCATATCAACCAACAGACTGTCAACATGGTCGTTGATACTAGGTCGACGTATAGTTTCATTCATACCAATGAAACTGGGCGGTTAAAGCTTGCTGTGACTCCAGTTATGCCATTTGTTGTTCGTGTGGCGAGCGAAGAGCGTTTGGAACGTAGAGAAATGTATACACGGGTCCAAATCAACATCCAGGGGTTCAAATTTTCTACTACATTATTTGACATTGCGTCTTTGGAGATCTGTACGCTTTTGGTACCCTTTCAGGTCGACAAAGTGGGACATTTGTCGACATTTAATGGAATCGAGCTGCGGAACTTTGATTCATCTATATCAGATCTGTGCAAGGAGGATGGTGTCTGCTCTGTTGGACATACTAATCTGAGTGAGAATTGCCTTAAGATACCTACTTCACTTCCAAGGAAGAAACGCTTCCATTCTGTGGGGGCTCCGTTCTTTCAGCAGCTTTCCTTAGGGTACCCCACGCCCGAAAGGAAACACCTGGTCTCGTGGGGTACAATGGAGCTGCATAATATTAACAGCAATTCTGCAAGTGTTGAGCTTTCTAGGGTGCAAGATAAGCTGAACAAGTCTCAGAGGATCTTCCACAAAAGTGTGCAGTTTGAAGATAACTTGCTGCATGACGAGAATCCCCGGCTGATCTGTGTCAACGACCCAAAGAGAACAAATGACAAGTATGAGTTCTCGGGCAATGAGATTACAACAAGCAAGTACACGTTGATCACCTTCTTGCCAAAAAATCTCTTCATTCAGTTTCACCGGGTTGCTTATCTATACTTCCTTGCTATTGCCGCTCTTAACCAGCTTCCACCTCTGGCAGTCTTTGGAAGAACGGTGTCCCTTTTTCCTCTCTTATTTGTGCTTTCTGTCACAGCTATCAAAGATGGTTATGAGGATTGGCGGAGGCATCGATCAGATCGCAAAGAAAACAATCGAGAGGCCCTTGTGTTTCAATCTGGCGAATTCCAACTCAAAAAATGGAAGAATATTTTAGCTGGTGAGGTGGTGAAGATCTGTGCTGATGAGAGCATCCCATGTGACATGGTTTTGTTAGGGAGCAGTGATCCTAGTGGACTTGCCTATATCCAGACAATGAATTTGGATGGTGAGTCAAACTTGAAAACAAGGTTTGCTAGGCAGGAAATGGCATCAGCAGTGACTGAGGGAAGTTCGATATCGGGGCTTATAAGATGTGAGCAACCTAATAGAAATATCTATGAGTTCACAGCCAACATGGAGTTCAGAAACCATAAATTTCCCCTCAGCCAATCAAACATAGTTCTACGTGGCTGTCAGCTGAAGAACACTGAATGGATTATTGGGGTTGTCGTCTATGCAGGGCAGGAAACAAAAGCGATGTTAAATAGTGCAGCTTCACCTTCGAAGAGAAGCAAACTGGAAGGTTATATGAACAGGGAAACATTGTGGTTATCTTTCTTCCTCTTTGTCATGTGTCTGGTTGTGGCTTTGGGAATGTGCTTATGGCTCGTGCGCCACAAGAACCGACTTGATACCATGCCTTATTACAGGAAAACATATATATCAGCATTAAAGGGTATTGGTAAAAAGTACAAATACTATGGAATACCGATGGAGACCTTTTTCTCCTTCTTGAGCTCTGTAATTGTCTTTCAGATAATGATACCGATATCTCTTTATATTACCATGGAATTAGTTCGTCTAGGTCAGTCATATTTCATGATTGAAGATGACCATATGTATGACAGTAATTCCGACTCAAGATTCCAGTGCAGATCATTGAATATTAATGAGGACCTAGGTCAAATACGCTACGTATTTTCGGATAAAACTGGAACACTTACTGAAAACAAAATGGAATTCCGACGAGCAAGTGTATATGGGAAGAATTATGGAAGCTCCTCTGCCGTAGCTGATCCATCAGACACAGAGAATGTTTCGGGAAGGAGATGGAGGCTCAAATCTAACATTCCTGTTGATCCGGAACTCCTCAAGTTGTTGCATAAGGACCTAACTGGAGATGAAAAGATATCTGTGCACGAATTTTTCCTTACTTTGGCCGCATGTAATACTGTAGTTCCCATTGTCGCTGGTGATGAACGTTGTAGTTGCACTAATAATGAGTTACAAGAAGATGCAGAAGCGATTGACTATCAGGGTGAATCTCCTGACGAGCAAGCTCTAGTTGCTGCAGCCTCTGCATATGGATATACTCTTTTTGAGCGCGCATCCGGGCATATTGAAATTGATGTCAATGGTGAGAATCTAAGGTTGGATGTTTTGGGCTTGCATGAGTTTGATAGTGTGCGCAAAAGAATGTCAGTTGTCATCAGATTTCCCGACAATACTGTTAAGGTTCTTGTGAAAGGTGCCGATACATCAATGTTCAGTACATTAGCAAATGTTTCTGAGAGGAATCATCATACAAAACTTGCAACTCAGGGTCATTTGACTGAATATTCATCAGAAGGTTTACGTACACTCGTGGTCGCTTCTAGAGACCTTTCCGAGGAAGAACTTGATGAATGGCAGAGTTGGTATGAAGATGCAAGCACTTCGTTGACTGATAGAGCCATAAAACTAAGACAAACAGCAGCTATTATTGAATGCAACTTAAAGCTTCTTGGCGCGACTGCTATTGAGGACAAGCTACAGGATGGTGTGCCAGAAGCCATTGAATCCCTTCGTCAAGCAGGAATAAAGGTGTGGGTTCTTACTGGAGATAAACAGGAGACTGCTATATCCATTGGCCTCTCTTGCAAACTCCTGACAGGAGATATGGAGCAGATTATTATCAATGGGAATTCAGAGAATGATTGTAGAAAGCTTTTGACTGAAGCAAAGATCAAGTGTGGTTTTAAGTTAGTGAATAGGAAAAATCCCGAGTTGGGGGTGGAACAGGTTTGGGAAAATGAATATCTTGAGATGTCAGGGGTTACAGAGTCACCTGGTCTGCCAGAATGGCATGCAGGGAAGGAAGAAAAAATGACGAGTGCACCACTAGCACTAATAATTGATGGAAACAGTTTGGTGTACATTTTGGAGAAAGATCTGGAGTCAGAGCTTTTTGACGTTGCAACCTCATGTAAGGTTGTAATATGCTGTCGTGTTGCACCCTTACAGAAAGCTGGGATTGTTGATCTAATCAAGAGCCGTACTGATGATATGACACTCGCGATAGGAGACGGGGCGAATGATGTATCAATGATTCAAATGGCTGATGTTGGTGTCGGCATATGTGGTCAAGAAGGGCGGCAGGCAGTGATGGCATCTGATTTTGCTATGGGACAGTTTTGTTTTCTGAAAAGATTACTTCTAGTACATGGACACTGGAATTATCAACGTGTTGGCTACATGGTTCTTTACAACTTCTACCGGAATGCTGTTTTTGTGTTGATGCTTTTCTGGTTTATCCTTTGCACAGCTTTCTCAACAACTTCTGCCTTAACAGATTGGAGTAGTGTATTATATTCTGTTGTCTATACATCAGTCCCTACTATTGTGGTTGGTATTCTGGACAAAGACTTGAGCCATAAGACACTGTTAAAATATCCGAAGCTCTATGGTTCGGGCTATAGGCACGAGGCTTACAATTTTCATCTGTTTTCAATTACAATGATTGACACACTATGGCAGAGTCTTGTTCTCTTCTATGTACCACTGTTCACCTACAGAGAGAGCACGATGGATATATGGAGCATGGGAAGTTTGTGGACATTAGCAGTTGTTGTCCTCGTGAATGTACACTTGGCAATGGATGTAAACCGTTGGGTTTTTATAACTCATGCTGCAGTGTGGGGATCCATAATCATTACATATACTTGCATGGTGATTCTGGATTTAATTCCATCATTTCCCAATTACTGGACAATTTTCCACTTGGCCAAATCTCCTAGCTATTGGCTCAACATTTTGCTTATAACAATTGTAGCATTGCTTCCTCGCTTTCTTTTCAAAGTTGTACATCAAAGCTTTTGGCCTTCAGATATTCAGATAGCAAGAGAAGCTGAGATATTGAGGCAAAGCTCATTTTCAGAGGACTTCCCCTTTGCAGGTGGCTCTCTCTGA 5721 44.01 MSDCLPSTTFTLSLPQFRHLGFSRCNWVPSRPKLPSSTKSYVTAVDNCRSQSVILRGTFFKCCSSSAFESEKDEFRHELGLKEKGDSLLDLESSYIDSVTRHNTVASSKGKKRDSHSGTAASSSTLDFIERNGRTEGEYKDRKLEEKGKGESDWRKGSAGLMKRRQVMKRSSLVAKQVISIQSALSLGFVSQLWVDTTAWMVLYVEVRPNLLSGESEWLLLEDVSQVGDVVLVQDETLMENEFRMAGLETLVGNKVVTPARRNIGKVRGYTFNINSGAVESLELDSFGISIIPSTLVSTYALLVEDVLEVVCDAVVVHEAAASRIQRLTKSERQTLDNDPRRTSKQAIKMATVLSQVSGSQHHLRPKAGRIPLQPINSSCTPLGTENCIRGKQDEGIRSLLLGESNKENRPIYAENEAPTKIEMLDASLGEELSAIKKKLERLTLDREKTDKLLKERELVLELQRKDLHERGQFQKALEMEVDKLYRLKELRSYCTRVSPIRSLREKEQGNRVHGGQGNKETNKIDSAAAESGDESSTSNSLGGSGLGTMRLQAHINQQTVNMVVDTRSTYSFIHTNETGRLKLAVTPVMPFVVRVASEERLERREMYTRVQINIQGFKFSTTLFDIASLEICTLLVPFQVDKVGHLSTFNGIELRNFDSSISDLCKEDGVCSVGHTNLSENCLKIPTSLPRKKRFHSVGAPFFQQLSLGYPTPERKHLVSWGTMELHNINSNSASVELSRVQDKLNKSQRIFHKSVQFEDNLLHDENPRLICVNDPKRTNDKYEFSGNEITTSKYTLITFLPKNLFIQFHRVAYLYFLAIAALNQLPPLAVFGRTVSLFPLLFVLSVTAIKDGYEDWRRHRSDRKENNREALVFQSGEFQLKKWKNILAGEVVKICADESIPCDMVLLGSSDPSGLAYIQTMNLDGESNLKTRFARQEMASAVTEGSSISGLIRCEQPNRNIYEFTANMEFRNHKFPLSQSNIVLRGCQLKNTEWIIGVVVYAGQETKAMLNSAASPSKRSKLEGYMNRETLWLSFFLFVMCLVVALGMCLWLVRHKNRLDTMPYYRKTYISALKGIGKKYKYYGIPMETFFSFLSSVIVFQIMIPISLYITMELVRLGQSYFMIEDDHMYDSNSDSRFQCRSLNINEDLGQIRYVFSDKTGTLTENKMEFRRASVYGKNYGSSSAVADPSDTENVSGRRWRLKSNIPVDPELLKLLHKDLTGDEKISVHEFFLTLAACNTVVPIVAGDERCSCTNNELQEDAEAIDYQGESPDEQALVAAASAYGYTLFERASGHIEIDVNGENLRLDVLGLHEFDSVRKRMSVVIRFPDNTVKVLVKGADTSMFSTLANVSERNHHTKLATQGHLTEYSSEGLRTLVVASRDLSEEELDEWQSWYEDASTSLTDRAIKLRQTAAIIECNLKLLGATAIEDKLQDGVPEAIESLRQAGIKVWVLTGDKQETAISIGLSCKLLTGDMEQIIINGNSENDCRKLLTEAKIKCGFKLVNRKNPELGVEQVWENEYLEMSGVTESPGLPEWHAGKEEKMTSAPLALIIDGNSLVYILEKDLESELFDVATSCKVVICCRVAPLQKAGIVDLIKSRTDDMTLAIGDGANDVSMIQMADVGVGICGQEGRQAVMASDFAMGQFCFLKRLLLVHGHWNYQRVGYMVLYNFYRNAVFVLMLFWFILCTAFSTTSALTDWSSVLYSVVYTSVPTIVVGILDKDLSHKTLLKYPKLYGSGYRHEAYNFHLFSITMIDTLWQSLVLFYVPLFTYRESTMDIWSMGSLWTLAVVVLVNVHLAMDVNRWVFITHAAVWGSIIITYTCMVILDLIPSFPNYWTIFHLAKSPSYWLNILLITIVALLPRFLFKVVHQSFWPSDIQIAREAEILRQSSFSEDFPFAGGSL 1906
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2347796 2360481 - Conep03aG0049700.1 Cone3ag0482 433941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0482 1906 CDD P-type_ATPase_APLT_Dnf-like 788 1771 - -
Cone3ag0482 1906 MobiDBLite consensus disorder prediction 506 544 - -
Cone3ag0482 1906 Gene3D - 1263 1401 IPR023299 GO:0000166(InterPro)
Cone3ag0482 1906 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 766 1886 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Cone3ag0482 1906 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1164 1439 IPR023299 GO:0000166(InterPro)
Cone3ag0482 1906 Pfam Cation transport ATPase (P-type) 1255 1349 - -
Cone3ag0482 1906 CDD retropepsin_like 552 636 - -
Cone3ag0482 1906 Gene3D - 847 1013 - -
Cone3ag0482 1906 SUPERFAMILY PRC-barrel domain 167 235 IPR011033 -
Cone3ag0482 1906 SUPERFAMILY Calcium ATPase, transmembrane domain M 786 1878 IPR023298 -
Cone3ag0482 1906 Pfam haloacid dehalogenase-like hydrolase 1406 1470 - -
Cone3ag0482 1906 SUPERFAMILY Calcium ATPase, transduction domain A 869 1010 IPR008250 -
Cone3ag0482 1906 Pfam Phospholipid-translocating P-type ATPase C-terminal 1639 1879 IPR032630 -
Cone3ag0482 1906 Gene3D - 1423 1649 IPR023214 -
Cone3ag0482 1906 MobiDBLite consensus disorder prediction 515 544 - -
Cone3ag0482 1906 SFLD Haloacid Dehalogenase 1142 1662 - -
Cone3ag0482 1906 PRINTS P-type cation-transporting ATPase superfamily signature 1611 1630 - -
Cone3ag0482 1906 PRINTS P-type cation-transporting ATPase superfamily signature 1158 1172 - -
Cone3ag0482 1906 Pfam Phospholipid-translocating ATPase N-terminal 774 837 IPR032631 -
Cone3ag0482 1906 Pfam E1-E2 ATPase 869 1114 - -
Cone3ag0482 1906 SFLD p-type atpase 1142 1662 IPR044492 -
Cone3ag0482 1906 SUPERFAMILY HAD-like 1153 1657 IPR036412 -
Cone3ag0482 1906 MobiDBLite consensus disorder prediction 106 127 - -
Cone3ag0482 1906 ProSitePatterns E1-E2 ATPases phosphorylation site. 1160 1166 IPR018303 -
Cone3ag0482 1906 NCBIfam phospholipid-translocating P-type ATPase 786 1886 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Cone3ag0482 1906 NCBIfam HAD-IC family P-type ATPase 1581 1697 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone3ag0482 1906 NCBIfam HAD-IC family P-type ATPase 1091 1183 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0980 Cone-Chr11:7892699 Cone3ag0482 Cone-Chr3:2347796 0 dispersed
Cone12ag1474 Cone-Chr12:10532489 Cone3ag0482 Cone-Chr3:2347796 1.43E-167 dispersed
Cone18ag0600 Cone-Chr18:3025610 Cone3ag0482 Cone-Chr3:2347796 0 dispersed
Cone3ag0482 Cone-Chr3:2347796 Cone8ag0629 Cone-Chr8:6217396 4.04E-216 dispersed
Cone10ag0448 Cone-Chr10:2084754 Cone3ag0482 Cone-Chr3:2347796 6.08E-77 transposed
Cone10ag0449 Cone-Chr10:2085817 Cone3ag0482 Cone-Chr3:2347796 2.64E-174 transposed
Cone10ag0447 Cone-Chr10:2076438 Cone3ag0482 Cone-Chr3:2347796 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0482 K14802 - csv:101206692 1912.5