Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0503 ATGGAATCAAAAGGATCGAAGTTCGGAAATTTTTTTGAGACAGCTAAGCCTTACATAGCAATGATATCTCTCCAATTTGGGTATGCTGGTATGAACATCATCACTAAGGTTTCCCTTAACCGTGGTATGAGCCATTACGTGCTCGTCGTTTACCGGCATGCGTTTGCCACTGCCGTTATCGCTCCTTTCGCCCTCATCCTTGAACGGAAAGTGAGGCCTAAAATTACCTTCCGTATTTTCATGCAAATTTTTGTTCTGGGTCTCCTTGGGCCGGTGATCGATCAAAATTTCTACTACGCCGGGCTGAAATTTACATCACCGACATTTTCTTGTGCTATGAGCAACATGCTCCCCGCAATGACATTTGTTATGGCGGTCATATTCAGGATGGAGAAGTTGGACATGAAGAAAGTAAGATGCCAAGCCAAAGTGGTGGGAACAATAGTGACAGTTGCTGGAGCCATGTTGATGACAATTTACAAAGGACACGTAATTAACTTCTTTTGGTCTGAGCATATGCACCATGTCAAGTCCTCATCACAGACTGGTAGTACTAATGGAGACAGTGATAAAGATTGGCTTAAAGGTTGCATTTTGCTCATCTTTGCTACTCTGGCTTGGGCTTTCTTCTTCATCCTCCAGGCAATAACAATGAGGAAATACACAGCTCCCCTCTCACTCACAAGCCTTGTGTGTTTCATGGGAACCCTACAATCAATAGCTGTTACTTTAGTTATGGAACACAAACCCCATGCTTGGGCAATTGGATGGGACATGAACCTTCTTGCTGCAGCCTATGCTGGGATAGTAGCATCAAGCATTGCATACTATGTTCAAGGGTTAGTCATGCAGAAAAGAGGGCCGGTTTTCGCAACAGCATTTAGCCCGTTGATGATGATCATCGTCGCCATCATGGGCTCCTTCATCCTCTCCGAAAAGATCTACCTCGGCGGTGTTCTTGGAGCTGTACTGATTGTAATGGGGCTGTACGCTGTTCTTTGGGGAAAGTACAAGGAATACAAAGAGAAGGAGGCAGAAACAATTCATGAAGTAATAGTAAAGGAGGGTGTAGAGAACGGTGGGATCAAAATGGTGATTCAAGAAATTGACGTAAATGACATCGAAATGCAGAAGAATAAAGCTGGGAACCAATTTGTTAATGCTAAAGCCTAG 1173 43.9 MESKGSKFGNFFETAKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAVIAPFALILERKVRPKITFRIFMQIFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVMAVIFRMEKLDMKKVRCQAKVVGTIVTVAGAMLMTIYKGHVINFFWSEHMHHVKSSSQTGSTNGDSDKDWLKGCILLIFATLAWAFFFILQAITMRKYTAPLSLTSLVCFMGTLQSIAVTLVMEHKPHAWAIGWDMNLLAAAYAGIVASSIAYYVQGLVMQKRGPVFATAFSPLMMIIVAIMGSFILSEKIYLGGVLGAVLIVMGLYAVLWGKYKEYKEKEAETIHEVIVKEGVENGGIKMVIQEIDVNDIEMQKNKAGNQFVNAKA 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2497111 2499342 + Conep03aG0051900.1 Cone3ag0503 433962
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0503 390 PANTHER WAT1-RELATED PROTEIN 19 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone3ag0503 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Cone3ag0503 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 337 - -
Cone3ag0503 390 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
Cone3ag0503 390 Pfam EamA-like transporter family 18 158 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag0935 Cone-Chr12:8157915 Cone3ag0503 Cone-Chr3:2497111 6.61E-86 dispersed
Cone13ag0643 Cone-Chr13:6466531 Cone3ag0503 Cone-Chr3:2497111 5.13E-212 dispersed
Cone15ag0154 Cone-Chr15:738176 Cone3ag0503 Cone-Chr3:2497111 1.09E-91 dispersed
Cone1ag1474 Cone-Chr1:57038676 Cone3ag0503 Cone-Chr3:2497111 8.03E-174 dispersed
Cone20ag0110 Cone-Chr20:496952 Cone3ag0503 Cone-Chr3:2497111 4.91E-74 dispersed
Cone2ag0146 Cone-Chr2:765602 Cone3ag0503 Cone-Chr3:2497111 3.71E-50 dispersed
Cone2ag0147 Cone-Chr2:768416 Cone3ag0503 Cone-Chr3:2497111 2.03E-57 dispersed
Cone3ag0503 Cone-Chr3:2497111 Cone5ag0463 Cone-Chr5:1957745 3.17E-175 dispersed
Cone3ag0503 Cone-Chr3:2497111 Cone19ag0646 Cone-Chr19:5539031 2.05E-211 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0503 - - - 0.0