Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0519 ATGGATTTCTTACAGACGGTCGATCCTCAGATTCTTCTGGGTTTGGCTGTCGCCGTTGTAGCCATTGGTGTTGCTGCTGCTTTTCTCTTCTCTTCTTCTAACAAGTCCAAGACCAGAGGCTGCTTAGATCCAGATAATTACAGGGAGTTTAAACTTGTCGAGCGCTTGCAGTTGAGCCATAATGTAGCCAAGTTCACTTTTGCACTTCCTACACCCACATCAGTTCTTGGTCTTCCCATTGGACAGCATATGAGTTGCAGGGGCAAGGATAATTTAGGAGAAGAGGTTATTAAACCATATACTCCTACGACTTTGGACTCTGATGTAGGGATTTTTGAATTAGTCATAAAGATGTATCCTCAAGGAAGAATGTCGCATCATTTCAGAGAGCTGCGTGTTGGGGATTATCTTGCTGTGAAGGGGCCTAAGGGGCGTTTCAAGTATCAACTTGGTCAAGTTAGAGCATTTGGGATGCTTGCTGGAGGCTCTGGAATCACTCCTATGTTTCAAGTTGCTCGAGCCATATTGGAAAACCCAATCGACAAAACAAAGGTGCACCTTATTTATGCTAATGTTGCATTTGAGGACATCCTCTTAAAGGAGGAGTTAGACTCTCTTGCTGCGAAATACCCAGATCGCTTCAAGATCTACTATGTCTTGAACAATCCTCCTGAAGTTTGGGATGGTGGGATCGGCTTTGTATCTGCAGACATGATTAAAACCCACTGCCCTGCCCCAGCTTCTGACATTCAGATTCTAAGGTGTGGGCCCCCACCTATGAACAAGGCCATGGCTGCTCATCTTGAGGCTCTAGGATACACACCCGAGATGCAGTTCCAATTCTGA 846 45.39 MDFLQTVDPQILLGLAVAVVAIGVAAAFLFSSSNKSKTRGCLDPDNYREFKLVERLQLSHNVAKFTFALPTPTSVLGLPIGQHMSCRGKDNLGEEVIKPYTPTTLDSDVGIFELVIKMYPQGRMSHHFRELRVGDYLAVKGPKGRFKYQLGQVRAFGMLAGGSGITPMFQVARAILENPIDKTKVHLIYANVAFEDILLKEELDSLAAKYPDRFKIYYVLNNPPEVWDGGIGFVSADMIKTHCPAPASDIQILRCGPPPMNKAMAAHLEALGYTPEMQFQF 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 2561974 2564741 + Conep03aG0053500.1 Cone3ag0519 433978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0519 281 Pfam Oxidoreductase FAD-binding domain 50 148 IPR008333 -
Cone3ag0519 281 Gene3D Translation factors 40 139 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 251 259 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 157 176 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 134 148 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 76 87 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 195 206 - -
Cone3ag0519 281 PRINTS Cytochrome B5 reductase signature 98 105 - -
Cone3ag0519 281 Gene3D - 140 281 IPR039261 -
Cone3ag0519 281 FunFam NADH-cytochrome b5 reductase 40 139 - -
Cone3ag0519 281 Pfam Oxidoreductase NAD-binding domain 158 264 IPR001433 GO:0016491(InterPro)
Cone3ag0519 281 SUPERFAMILY Riboflavin synthase domain-like 42 148 IPR017938 -
Cone3ag0519 281 FunFam NADH-cytochrome b5 reductase 139 281 - -
Cone3ag0519 281 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 137 277 IPR039261 -
Cone3ag0519 281 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 45 149 IPR017927 GO:0016491(InterPro)
Cone3ag0519 281 PANTHER NADH-CYTOCHROME B5 REDUCTASE 19 281 IPR001834 GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER)
Cone3ag0519 281 CDD cyt_b5_reduct_like 50 281 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0382 Cone-Chr1:3268924 Cone3ag0519 Cone-Chr3:2561974 3.58E-155 dispersed
Cone3ag0519 Cone-Chr3:2561974 Cone5ag1478 Cone-Chr5:9871340 2.67E-157 dispersed
Cone10ag0494 Cone-Chr10:2284887 Cone3ag0519 Cone-Chr3:2561974 9.84E-195 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0519 K00326 - rcu:8268574 473.781