Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0542 | ATGGTTAATGCTCCATGTGGGGCGTGCAAATTCTTGAGAAGGAAGTGCGTAAGTGGGTGCATATTTTCACCTCACTTTGGGTCCGACCAAGGTGCGGCTAGGTTCGCTGCGGTGCATAAGGTGTTCGGTGCGAGTAATGTATCGAAGCTCTTGTTGCATATACCTGTGAACCGGAGACCTGTTGCTGTGGTGACCATATCTTATGAGGCTCAGGCAAGATTGTCTGACCCGGTTTATGGTTGCGTCTCTACCATACTCGCTTTACAGCAACAGGTGGCAACCTTGCAAGCTGAGCTAGCGGTGGTGCAAACGCAACTTATGAACAGTAGAATGGCGTTTACAAATGCAATAAAGAGCTCACAACAAGATCATCATCAAGAACACCAAATGGCAGGAATGTTGGGTCAACAGATATTACCGGCGTACTCCAATAACTCCTCCGCCTCGAATAATCTAATCAATATCTCTGCCGTCACCACCACCACCACCACCAACACTACTGCCTTCCCTGCCGCAAACAATTTCAACCTTGCACCAGGTAAAACCACAGCACCACTATCCTCAGGCCAGAGCTATGAGCCACTTTACCTTAGTTCACATCCTTCGCTCCGTGAAGATCAGGAACAAGAAGATGATGAACAAGAGAGTAGTCACGTTCCTACGCCTGCTTGCATGTTCAATAATCATGATTTACTTCACTCTAGGTAA | 708 | 47.46 | MVNAPCGACKFLRRKCVSGCIFSPHFGSDQGAARFAAVHKVFGASNVSKLLLHIPVNRRPVAVVTISYEAQARLSDPVYGCVSTILALQQQVATLQAELAVVQTQLMNSRMAFTNAIKSSQQDHHQEHQMAGMLGQQILPAYSNNSSASNNLINISAVTTTTTTNTTAFPAANNFNLAPGKTTAPLSSGQSYEPLYLSSHPSLREDQEQEDDEQESSHVPTPACMFNNHDLLHSR | 235 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 2684662 | 2685446 | + | Conep03aG0055800.1 | Cone3ag0542 | 434001 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0542 | 235 | Coils | Coil | 85 | 105 | - | - | |
Cone3ag0542 | 235 | Pfam | Lateral organ boundaries (LOB) domain | 5 | 103 | IPR004883 | - | |
Cone3ag0542 | 235 | PANTHER | LOB DOMAIN CONTAINING PROTEIN | 4 | 187 | - | GO:0005634(PANTHER)|GO:0009755(PANTHER)|GO:0045893(PANTHER) | |
Cone3ag0542 | 235 | MobiDBLite | consensus disorder prediction | 174 | 235 | - | - | |
Cone3ag0542 | 235 | ProSiteProfiles | LOB domain profile. | 4 | 106 | IPR004883 | - | |
Cone3ag0542 | 235 | MobiDBLite | consensus disorder prediction | 174 | 197 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0542 | Cone-Chr3:2684662 | Cone7ag1008 | Cone-Chr7:7775944 | 1.41E-45 | dispersed | |
Cone3ag0542 | Cone-Chr3:2684662 | Cone4ag1122 | Cone-Chr4:9698498 | 1.06E-45 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45801 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0542 | - | - | - | 0.0 |