Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0623 ATGTTGCTGCCTTTGATCGCAATGCTAGTCACGATCATCTCACTGGCAGTCCTTGTATCGGGAACCGCCAATATAATCCCTTCAGATTCATCGAAGCTAAATGAGTGGATTGCTCGCAACATGAGACAGCACCGTGAGGGGCTCGACGACCCGAAACTCCCTCCCGGTGCAAAAAGGAATGAGCAAGACGAGCGACTGACGGCAGAGGAACATGTTAAGATAGTGAGGGTGAGGAAAGATGGAAGGGGGGACTTTAAGACTATTAAGGATGCCATCGACAGCATTCCATGTGGAAATACAAACCGGGTTGTGATTTGCATAGCTGGTGGGGAGTATCGAGAGAAGATAACAATAGATAGATGTAAGCCATTTGTGACGTTATATGGAGAGAACGGCAACATGCCCATCATATCCTTTGATGGTACTGCATATAAGTACGGGACAGTGTATAGCGCCACCGTGGCTGTTGAGTCGGACTACTTTGTCGCCGTCAATATCGCCTTTGTGAACTCGGCACCAATGCCGGATGGGAAAAGGGTGGGAGCCCAAGCAGTGGCAATGAGGATATCAGGCGATAAGTCTGCATTTCATAACTGCAAATTCATAGGGTTTCAAGACACCTTGTGCGATGATAAGGGAAGACATTTCTTCCGAGATTGTTACATTGAGGGCACTGTTGATTTCATTTTTGGGAACGGAAAGTCTTTATACTTGAATACAACCATAAAATCAGTAGCAAACGGGATGGGAGTTATCACGGCACAAGCGAGGGTAAAGGTAGATGATGATAGTGGATTCGCATTCGCATTTTGCAAGATAATCGGAAGCAGAGATACCTACTTAGGGAGAGCTTGGAAGGAGAGATCAAGAGTGGTATTTGCTTATACATACATGGGAAGCCTTATCAACACTCAAGGATGGTTGAATAACAACAACGCTGGAACCGCATATTTTGGAGAGTACAAGTGTTCGGGACCGGGAGCAAGCTCTAATAAACGCACACATTATGCAAGAAAAATGTCCGATGAAGAAGCTAATGCTTTCTTGAGCATGACTTTCATCAACGGAAACAAATGGCTTCTTCCGGTTCCCAAACTCTAA 1101 45.5 MLLPLIAMLVTIISLAVLVSGTANIIPSDSSKLNEWIARNMRQHREGLDDPKLPPGAKRNEQDERLTAEEHVKIVRVRKDGRGDFKTIKDAIDSIPCGNTNRVVICIAGGEYREKITIDRCKPFVTLYGENGNMPIISFDGTAYKYGTVYSATVAVESDYFVAVNIAFVNSAPMPDGKRVGAQAVAMRISGDKSAFHNCKFIGFQDTLCDDKGRHFFRDCYIEGTVDFIFGNGKSLYLNTTIKSVANGMGVITAQARVKVDDDSGFAFAFCKIIGSRDTYLGRAWKERSRVVFAYTYMGSLINTQGWLNNNNAGTAYFGEYKCSGPGASSNKRTHYARKMSDEEANAFLSMTFINGNKWLLPVPKL 366
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3081664 3082898 - Conep03aG0064100.1 Cone3ag0623 434082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0623 366 FunFam Pectinesterase 70 362 - -
Cone3ag0623 366 Pfam Pectinesterase 76 357 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cone3ag0623 366 Gene3D - 70 364 IPR012334 -
Cone3ag0623 366 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 24 360 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Cone3ag0623 366 ProSitePatterns Pectinesterase signature 2. 222 231 IPR033131 -
Cone3ag0623 366 MobiDBLite consensus disorder prediction 45 64 - -
Cone3ag0623 366 SUPERFAMILY Pectin lyase-like 74 362 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0623 Cone-Chr3:3081664 Cone5ag1415 Cone-Chr5:8855432 2.84E-122 dispersed
Cone3ag0622 Cone-Chr3:3079181 Cone3ag0623 Cone-Chr3:3081664 6.29E-245 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0623 K01051 - vvi:100244050 471.855