Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0678 | ATGGAACCCAATGATAACCAACTGAGTTCGTACTATCACCCTCAGCCCACCCACCCCCATCACCACCACCACCACCACCAGAATCCGGTCGCATCTCCGAACAATGGGATTTTTCCTAACACCCATCAAATGTCAGCCGCCCCCACCAACTCTGCTCCAGAGGGTGGTGGTGGAGGACCCCACATGGTGTTCCCTCACTCCGTGCCTTCGGCGGCGGTTTCTTCATCGCCGTTAGAGCCTGCGGCCAGGAGGAAGAGAGGAAGACCTAGAAAGTATGGAACCCCAGAACAAGCTTTGGCTGCTAAGAAAGCTGCTACGGCGTCGTCTCATAACTCTTCTTCTTCTAGGGACAAGAAGGACGATGGCTCCCTTCGTGCTCCCTCTGCTTCTCCTTCCTTATCTGGCTCCTCTAAGAAATCCCACTTCGTCGATTCATGTAATGGTGGTCAAGGCTTTACAGTACATGTTATTGATGTGGCAGCTGGTGAGGATGTGGGCCAGAAAATTATGTTGTTCATGCAACAAAGTAAGCGGGAAATATGTATTCTATCGGCATCTGGGTCTATCTCTAATGCATCTCTTAGACAGCCTGCAACATCAGGGGGTAATATCACATATGAGGGTCGTTTCGAGATTGTATCGCTTTGTGGATCTTATATACGTACTGAGATGGGAGGAAGGACAGGTGGGCTCAGTGTATGTCTGTCTAGTACTGATGGCCAGATCATTGGAGGTGGAGTTGGTGGGCCCCTAAAGGCTGCAGGCCCTGTACAGATTATTGTGGGCACATTTCTAATCGATGCCAAGGAAGCTAGAGTCGGTGTAAAAGGTGATGCTTCTACCAGAAAGTTGCCATCGCCTATTGGTGGTTCTGCACTACCGAACGTAGTCTATCGGTCAGCAGTAGATTCTTCCGGAAGGAATCCCACAAGTAGGGGAAACGATGATTTTCAAGGTATTGGAGGGAGTCATTTCATGCTTCAACCCCATGGGGTCCATTTGGCAGGCCCACACACCACAGATTGGAGAAATGACCTGGATGCTAGAAATACTACTCCCGGTTATGAATTGACAGCAAAAGGAGGTCGTATAATGCATCAATCTCCGGAAAATGGGGACTATGATCAGATTCAGGATTAG | 1140 | 49.39 | MEPNDNQLSSYYHPQPTHPHHHHHHHQNPVASPNNGIFPNTHQMSAAPTNSAPEGGGGGPHMVFPHSVPSAAVSSSPLEPAARRKRGRPRKYGTPEQALAAKKAATASSHNSSSSRDKKDDGSLRAPSASPSLSGSSKKSHFVDSCNGGQGFTVHVIDVAAGEDVGQKIMLFMQQSKREICILSASGSISNASLRQPATSGGNITYEGRFEIVSLCGSYIRTEMGGRTGGLSVCLSSTDGQIIGGGVGGPLKAAGPVQIIVGTFLIDAKEARVGVKGDASTRKLPSPIGGSALPNVVYRSAVDSSGRNPTSRGNDDFQGIGGSHFMLQPHGVHLAGPHTTDWRNDLDARNTTPGYELTAKGGRIMHQSPENGDYDQIQD | 379 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3456206 | 3461159 | + | Conep03aG0069600.1 | Cone3ag0678 | 434137 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 29 | 50 | - | - | |
Cone3ag0678 | 379 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 150 | 265 | - | - | |
Cone3ag0678 | 379 | Gene3D | - | 153 | 279 | - | - | |
Cone3ag0678 | 379 | ProSiteProfiles | PPC domain profile profile. | 148 | 285 | IPR005175 | - | |
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 127 | 141 | - | - | |
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 1 | 141 | - | - | |
Cone3ag0678 | 379 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 34 | 287 | IPR039605 | GO:0003680(InterPro) | |
Cone3ag0678 | 379 | CDD | DUF296 | 153 | 264 | IPR005175 | - | |
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 302 | 322 | - | - | |
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 360 | 379 | - | - | |
Cone3ag0678 | 379 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 154 | 264 | IPR005175 | - | |
Cone3ag0678 | 379 | MobiDBLite | consensus disorder prediction | 302 | 317 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0678 | Cone-Chr3:3456206 | Cone6ag0720 | Cone-Chr6:3625087 | 2.38E-39 | dispersed | |
Cone10ag0649 | Cone-Chr10:3122384 | Cone3ag0678 | Cone-Chr3:3456206 | 5.87E-219 | wgd | |
Cone3ag0678 | Cone-Chr3:3456206 | Cone5ag0555 | Cone-Chr5:2375683 | 1.94E-20 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0678 | - | - | - | 0.0 |