Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0703 ATGTCAGCCCAGAGTCAGAGCTGCAGTCGAATCTTGCCAAGCCGCTGGCATGAACACAAAAATGATAACAGGCAACAACATTCACACTGCAAAGGCTATATAGCCATTGAATGTGGGATATTAAACCCAGATGAGGATTTAGATGAGGAAGCTCTAGTAGGAGTTCAATTTAGAAATTACTCTCACAAGGAGAGAATCAAAAAGGTCGAGAAGATCAAAGTAATGGCCAGATCCTCTCTGTTCGATAAGCTTGAAATGGTGCAGTGCTCGAAGCAGAAAGGCCATGTGGTGGCAGTTACATGCGATGGTACAAATGATGCTCCAGCTTTAAAAGAAGCCGATATTGGGCTTTCTATGGGGATACAAGGCACAGAAGTGGCAAAGGAGAGCTCAGATATAGTTATCTTGGATGATAACTTTGCTTCAGTTGTGACGGTTTCAAGGTGGGGCCGGTGTGATTACAACAGTATCCAGAAATTCATTCAGTTTCAACTAACTGTAAATGTGGCGGTCCTTATCATCAACTTTGCTGCAGCTATTTCTTCCGGAAAAGTCCCTCTAACTGCTGTTCAGTTATTATGGGTCAACCTCATAATGGACACTTTAGGAGCCTTAGCATTAGCAACTGATCCGCCTACTAATGATCTTATGGTGAAACCGCCTGTATGTCAATCAGAGCCGTTGATTAGTGTGATCACGTGGAGGAATCTGATCGGTCAGGCATTGTACCAGCTGGTCATGGTGGAGTTTCTGAAAAAGTTCGCTGATACTAAGAGGCTCGATTGGGCCCTATGGGGTGCTTGCATTGGCATTGCCGCTTTGTCTTGGCCAATTGGATGGATTGTTAAGTGCATTCTTGTTTCAAGTGTAGTGAAGTGGTGGACTGACCTTAGAATGTTTGGACCTATTGAGAAAATTGCTTCAACCTTTGAAAATCTACAAGGTTAG 948 43.67 MSAQSQSCSRILPSRWHEHKNDNRQQHSHCKGYIAIECGILNPDEDLDEEALVGVQFRNYSHKERIKKVEKIKVMARSSLFDKLEMVQCSKQKGHVVAVTCDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVVTVSRWGRCDYNSIQKFIQFQLTVNVAVLIINFAAAISSGKVPLTAVQLLWVNLIMDTLGALALATDPPTNDLMVKPPVCQSEPLISVITWRNLIGQALYQLVMVEFLKKFADTKRLDWALWGACIGIAALSWPIGWIVKCILVSSVVKWWTDLRMFGPIEKIASTFENLQG 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3598745 3600299 + Conep03aG0072100.1 Cone3ag0703 434162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0703 315 Gene3D - 34 145 IPR023214 -
Cone3ag0703 315 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 287 IPR023298 -
Cone3ag0703 315 Pfam Cation transporting ATPase, C-terminus 185 247 IPR006068 -
Cone3ag0703 315 PRINTS H+-transporting ATPase (proton pump) signature 100 116 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone3ag0703 315 PRINTS H+-transporting ATPase (proton pump) signature 132 157 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone3ag0703 315 SUPERFAMILY HAD-like 33 146 IPR036412 -
Cone3ag0703 315 PRINTS P-type cation-transporting ATPase superfamily signature 124 136 - -
Cone3ag0703 315 PRINTS P-type cation-transporting ATPase superfamily signature 100 119 - -
Cone3ag0703 315 NCBIfam HAD-IC family P-type ATPase 70 181 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Cone3ag0703 315 Gene3D - 146 248 - -
Cone3ag0703 315 PANTHER CATION TRANSPORTING ATPASE 244 287 - GO:0005388(PANTHER)|GO:0005887(PANTHER)|GO:0019829(PANTHER)|GO:0043231(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0703 Cone-Chr3:3598745 Cone6ag1463 Cone-Chr6:11673578 4.64E-74 dispersed
Cone10ag0678 Cone-Chr10:3288120 Cone3ag0703 Cone-Chr3:3598745 2.91E-135 wgd
Cone17ag0579 Cone-Chr17:3019882 Cone3ag0703 Cone-Chr3:3598745 2.49E-111 wgd
Cone20ag0830 Cone-Chr20:5889956 Cone3ag0703 Cone-Chr3:3598745 2.53E-119 wgd
Cone3ag0703 Cone-Chr3:3598745 Cone4ag0278 Cone-Chr4:1262302 9.48E-113 wgd
Cone3ag0703 Cone-Chr3:3598745 Cone7ag0285 Cone-Chr7:1209868 2.46E-111 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0703 K01537 - mdm:103419498 329.717