Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0714 | ATGAATGGTGTTGAACAAGATTACCCTGAATTTGTTGAAGTTGATCCCTCTGGCAGATATGGAAGATACAATGAAATCCTTGGAAAAGGAGCTTCGAAGACAGTGTACAGAGCATTTGATGAATACGAAGGAATAGAAGTTGCCTGGAATCAAGTCAAGCTTTCTGAATATCTCCAAAGCCCTCAACATCTTGACAAAGTCAACTCAGAAATTCATCTTCTAAAGACACTAAATCATAACAACATCATCAAGTTCCATACTTCTTGGCTTGATTCTTCAAACAGGAACATCAACTTTGTCACTGAAATGTTCACTTCTGGCACTTTAAGACAGTATAGGCTAAAGCACAAAAGAGTTAATGTTAGGGCAGTGAAGAATTGGTGTAGACAGATATTGAGAGGGCTTGTCTATCTGCATGACCATGACCCTCCTGTAATTCATAGAGACCTCAAGTGTGATAACATCTTTGTTAATGGCAACCTTGGTGAAGTCAAGATTGGAGACCTCGGCCTTGCATCAGTCCTCTCCAAATCACATGCCACATCCTGTGTCGGAACACCAGAATTCATGGCCCCTGAAATGTATCGAGAATCATACAATGAATTGGTTGATATTTATTCATTCGGAATGTGCATATTGGAGATGGTCACTTTTGAGTACCCGTATAGTGAATGCACTCATTCTGCTCAAATCTACAATCAAGTTATTTCCGGTAAAAAGCCAGATGCCTTTTACAAAGTAAACATTCGAGAAGTGCGAAAATTCATTGAGAAATGCTTGGTCAACGTGTCATTCAGGCCATCAGCAAGAGAGCTCTTGAATGACACTTTTCTGCAAATTGATGATGAAATGGGTCCTACTTTGAGTCATTCTTTTCTCGAACCCTACAGAATTGAATCTGATCATCCCTGTTCTGAGATCTCGAGCGAAACAGAAACTTGTGGAATTGAACTTTTCGATGACAATGAAGTCGTGGATTCAGAAGATGGTGAAATAGGCATTGAAGGCAGAATGAGAGAAAATGGTCACATCTTTATGAGACTCAGAATGGCAGATAAACAAGGCGGTTTTCGGAACATTTATTTCCCTTTTGAACCGGAAGTGGACACAGCATTTACAGTTGCAACTGAAATGATCACAGAGCTCGATATAACAGACCAAGACGTGACCAGAATAGCAGACATGATTGATACAGAAATTGCTTCCTTGCTGCCTGAGTGGAGCCCGGGGCTTGACCTAACTGACCAAAGTTATCGACCGAGCTGTGCTTCTACCCGAAACATGAATCATAATTGTAGACATCAGAGTGCTTCAATGCATGGTCGGTTCAATGAGATTATGTCAGAAGCAAATGAGTCTCGCCAGGGTAATTCAGTGAGCTCTAGACAGAGCCTTTCGGACAAAGAACTCAGAGAGAAAATGAATCTAAGATTGTTGAAAAACAAAGTTGGTCCTGATCGGAAAAGTTCTCTTGGAAACTTATCCGATCCTCTCTCTTTTGCTGCAATCCCTGCATTGTATCTTAGCTGGAGGTGA | 1536 | 40.95 | MNGVEQDYPEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLSEYLQSPQHLDKVNSEIHLLKTLNHNNIIKFHTSWLDSSNRNINFVTEMFTSGTLRQYRLKHKRVNVRAVKNWCRQILRGLVYLHDHDPPVIHRDLKCDNIFVNGNLGEVKIGDLGLASVLSKSHATSCVGTPEFMAPEMYRESYNELVDIYSFGMCILEMVTFEYPYSECTHSAQIYNQVISGKKPDAFYKVNIREVRKFIEKCLVNVSFRPSARELLNDTFLQIDDEMGPTLSHSFLEPYRIESDHPCSEISSETETCGIELFDDNEVVDSEDGEIGIEGRMRENGHIFMRLRMADKQGGFRNIYFPFEPEVDTAFTVATEMITELDITDQDVTRIADMIDTEIASLLPEWSPGLDLTDQSYRPSCASTRNMNHNCRHQSASMHGRFNEIMSEANESRQGNSVSSRQSLSDKELREKMNLRLLKNKVGPDRKSSLGNLSDPLSFAAIPALYLSWR | 511 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3663301 | 3665467 | + | Conep03aG0073500.1 | Cone3ag0714 | 434173 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0714 | 511 | Gene3D | Transferase(Phosphotransferase) domain 1 | 104 | 283 | - | - | |
Cone3ag0714 | 511 | ProSiteProfiles | Protein kinase domain profile. | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0714 | 511 | Gene3D | - | 342 | 420 | - | - | |
Cone3ag0714 | 511 | FunFam | probable serine/threonine-protein kinase WNK9 | 104 | 283 | - | - | |
Cone3ag0714 | 511 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 102 | - | - | |
Cone3ag0714 | 511 | SMART | serkin_6 | 21 | 278 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0714 | 511 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 145 | 157 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone3ag0714 | 511 | CDD | STKc_WNK | 19 | 278 | - | - | |
Cone3ag0714 | 511 | Pfam | Protein kinase domain | 24 | 277 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0714 | 511 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 279 | IPR011009 | - | |
Cone3ag0714 | 511 | FunFam | Probable serine/threonine-protein kinase WNK1 | 5 | 102 | - | - | |
Cone3ag0714 | 511 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 9 | 467 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
Cone3ag0714 | 511 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 346 | 400 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0714 | Cone-Chr3:3663301 | Cone7ag0248 | Cone-Chr7:1045463 | 2.26E-193 | dispersed | |
Cone1ag1727 | Cone-Chr1:58069521 | Cone3ag0714 | Cone-Chr3:3663301 | 4.14E-206 | wgd | |
Cone10ag0695 | Cone-Chr10:3509380 | Cone3ag0714 | Cone-Chr3:3663301 | 1.94E-262 | wgd | |
Cone3ag0714 | Cone-Chr3:3663301 | Cone5ag0535 | Cone-Chr5:2272794 | 9.80E-207 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82680 | PF01612 | DNA_pol_A_exo1 | 6.80E-44 | CL0219 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0714 | K08867 | - | csv:101219552 | 625.55 |