Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0714 ATGAATGGTGTTGAACAAGATTACCCTGAATTTGTTGAAGTTGATCCCTCTGGCAGATATGGAAGATACAATGAAATCCTTGGAAAAGGAGCTTCGAAGACAGTGTACAGAGCATTTGATGAATACGAAGGAATAGAAGTTGCCTGGAATCAAGTCAAGCTTTCTGAATATCTCCAAAGCCCTCAACATCTTGACAAAGTCAACTCAGAAATTCATCTTCTAAAGACACTAAATCATAACAACATCATCAAGTTCCATACTTCTTGGCTTGATTCTTCAAACAGGAACATCAACTTTGTCACTGAAATGTTCACTTCTGGCACTTTAAGACAGTATAGGCTAAAGCACAAAAGAGTTAATGTTAGGGCAGTGAAGAATTGGTGTAGACAGATATTGAGAGGGCTTGTCTATCTGCATGACCATGACCCTCCTGTAATTCATAGAGACCTCAAGTGTGATAACATCTTTGTTAATGGCAACCTTGGTGAAGTCAAGATTGGAGACCTCGGCCTTGCATCAGTCCTCTCCAAATCACATGCCACATCCTGTGTCGGAACACCAGAATTCATGGCCCCTGAAATGTATCGAGAATCATACAATGAATTGGTTGATATTTATTCATTCGGAATGTGCATATTGGAGATGGTCACTTTTGAGTACCCGTATAGTGAATGCACTCATTCTGCTCAAATCTACAATCAAGTTATTTCCGGTAAAAAGCCAGATGCCTTTTACAAAGTAAACATTCGAGAAGTGCGAAAATTCATTGAGAAATGCTTGGTCAACGTGTCATTCAGGCCATCAGCAAGAGAGCTCTTGAATGACACTTTTCTGCAAATTGATGATGAAATGGGTCCTACTTTGAGTCATTCTTTTCTCGAACCCTACAGAATTGAATCTGATCATCCCTGTTCTGAGATCTCGAGCGAAACAGAAACTTGTGGAATTGAACTTTTCGATGACAATGAAGTCGTGGATTCAGAAGATGGTGAAATAGGCATTGAAGGCAGAATGAGAGAAAATGGTCACATCTTTATGAGACTCAGAATGGCAGATAAACAAGGCGGTTTTCGGAACATTTATTTCCCTTTTGAACCGGAAGTGGACACAGCATTTACAGTTGCAACTGAAATGATCACAGAGCTCGATATAACAGACCAAGACGTGACCAGAATAGCAGACATGATTGATACAGAAATTGCTTCCTTGCTGCCTGAGTGGAGCCCGGGGCTTGACCTAACTGACCAAAGTTATCGACCGAGCTGTGCTTCTACCCGAAACATGAATCATAATTGTAGACATCAGAGTGCTTCAATGCATGGTCGGTTCAATGAGATTATGTCAGAAGCAAATGAGTCTCGCCAGGGTAATTCAGTGAGCTCTAGACAGAGCCTTTCGGACAAAGAACTCAGAGAGAAAATGAATCTAAGATTGTTGAAAAACAAAGTTGGTCCTGATCGGAAAAGTTCTCTTGGAAACTTATCCGATCCTCTCTCTTTTGCTGCAATCCCTGCATTGTATCTTAGCTGGAGGTGA 1536 40.95 MNGVEQDYPEFVEVDPSGRYGRYNEILGKGASKTVYRAFDEYEGIEVAWNQVKLSEYLQSPQHLDKVNSEIHLLKTLNHNNIIKFHTSWLDSSNRNINFVTEMFTSGTLRQYRLKHKRVNVRAVKNWCRQILRGLVYLHDHDPPVIHRDLKCDNIFVNGNLGEVKIGDLGLASVLSKSHATSCVGTPEFMAPEMYRESYNELVDIYSFGMCILEMVTFEYPYSECTHSAQIYNQVISGKKPDAFYKVNIREVRKFIEKCLVNVSFRPSARELLNDTFLQIDDEMGPTLSHSFLEPYRIESDHPCSEISSETETCGIELFDDNEVVDSEDGEIGIEGRMRENGHIFMRLRMADKQGGFRNIYFPFEPEVDTAFTVATEMITELDITDQDVTRIADMIDTEIASLLPEWSPGLDLTDQSYRPSCASTRNMNHNCRHQSASMHGRFNEIMSEANESRQGNSVSSRQSLSDKELREKMNLRLLKNKVGPDRKSSLGNLSDPLSFAAIPALYLSWR 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3663301 3665467 + Conep03aG0073500.1 Cone3ag0714 434173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0714 511 Gene3D Transferase(Phosphotransferase) domain 1 104 283 - -
Cone3ag0714 511 ProSiteProfiles Protein kinase domain profile. 21 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0714 511 Gene3D - 342 420 - -
Cone3ag0714 511 FunFam probable serine/threonine-protein kinase WNK9 104 283 - -
Cone3ag0714 511 Gene3D Phosphorylase Kinase; domain 1 5 102 - -
Cone3ag0714 511 SMART serkin_6 21 278 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0714 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0714 511 CDD STKc_WNK 19 278 - -
Cone3ag0714 511 Pfam Protein kinase domain 24 277 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0714 511 SUPERFAMILY Protein kinase-like (PK-like) 24 279 IPR011009 -
Cone3ag0714 511 FunFam Probable serine/threonine-protein kinase WNK1 5 102 - -
Cone3ag0714 511 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 9 467 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Cone3ag0714 511 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 346 400 IPR024678 GO:0004674(InterPro)|GO:0005524(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0714 Cone-Chr3:3663301 Cone7ag0248 Cone-Chr7:1045463 2.26E-193 dispersed
Cone1ag1727 Cone-Chr1:58069521 Cone3ag0714 Cone-Chr3:3663301 4.14E-206 wgd
Cone10ag0695 Cone-Chr10:3509380 Cone3ag0714 Cone-Chr3:3663301 1.94E-262 wgd
Cone3ag0714 Cone-Chr3:3663301 Cone5ag0535 Cone-Chr5:2272794 9.80E-207 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82680 PF01612 DNA_pol_A_exo1 6.80E-44 CL0219 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0714 K08867 - csv:101219552 625.55