Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0716 | ATGGCTGGTTTGGAGGAATTGAAGAAGAAGCTTACCCCGTTGGGACTTGCAGTGGAATCAACTCTAGACCCTAATGATTCCTGCACATTTTCGAATGGAGGGACTGTTAATTTGTTGAGTAGATCGTATGGGCTGTATAATATTAATGAGCTTGGATTGCAAAAGTGTACGACTTGGCCGGTGGATAATGATTCGGAGTCTAGTGAGAAGACTTACCGATGTGGTTCAAGCGAGATGAGGATATTTGGAGCTATAGGCTGTGGAGCTAGCAGTGTTGTTCAGAGAGCTATTCATATTCCCACTCATAGAATTTTGGCATTGAAGAAGATCAATATCTTTGAAAAGGAGAAAAGGCAACAACTTCTTACAGAGATAAGGACCTTGTGTGAATCACCTTGTTACGAGGGTCTTGTGGAATTCCATGGGGCATTTTATACACCAGACTCTGGTCAAATAAGCATAGCCTTAGAGTACATGGATGGAGGGTCTTTAGCGGATATTTTACGGTTGAAGAAATGTTTACCTGAGCACATTCTTTCATCAATGTTCCGGAAGCTTCTCCGTGGACTTAGCTACTTGCATGGAGTTAGACATTTAGTTCATAGAGATATAAAGCCTGCAAATTTGCTTGTCAATCTCAAGGGTGAGCCAAAAATAACAGATTTCGGTATAAGTGCTGGCTTAGAGAATTCTATGGCAATGTGTGCTACTTTTGTTGGAACGGTAACATACATGTCACCCGAGCGAATTAGAAATGAAAATTATTCATATCCAGCTGATATATGGAGCCTTGGACTTGCTCTCTTCGAGTGTGGTACTGGAGAATTCCCATATTCTGCCGCTGAAGGTCCTGTGAATCTTATGTTACAGATTCTGGAAGATCCATCTCCATCACCACCAAAACAAAAATTTTCACCAGAATTCTGCTCGTTTATTGATGTCTGCTTGCAAAAGGATCCAGATTCTAGGCCAACATCAGATCAACTACTTTCACACCCATTTATCACGAAGTACGAGGATGCACAAGTAGACTTAGAATCATTTGTTCGAGAAGTATTCGATCCAACACAGCGGATGAAGGAGTTGGCAGATATGCTTACAATTCACTATTACTTACTCATGGACGGTCCAAATGAATTCTGGAACCACACAAAGGACTTCTACAACGGAAGTTCAACTCTCAGTTTCTCAGGGAAGCAATTTACGGGTCCAAACGAAATATTCGAGACTCTGACAAACATACAGAGTACACTAGCCGGAGAGTGGCCGCCTGAAAAAATAGTCCATGTTGTGGAGAAACTTCAGTGCCGGGCCCACGGTCCGGGAGGAATTGCAATTAGGGTTTGGGGATCTTTCATAATTGGGAATCAGTTCCTTATATGTGGAGACGGATTACAAGCCGAGGGAATTCCGAATTTTAAGGATCTTGCCATTGATGTTTCGAGTAAGAGAATGGGAACGTTTCGAGAACAGTTTGTGATGGAGCCAAGTAATGTTATTGGTTGCTACGTAATAGCCAAACAAGAGCTTTACATAACTCAAGTAGAGAACTAG | 1554 | 41.96 | MAGLEELKKKLTPLGLAVESTLDPNDSCTFSNGGTVNLLSRSYGLYNINELGLQKCTTWPVDNDSESSEKTYRCGSSEMRIFGAIGCGASSVVQRAIHIPTHRILALKKINIFEKEKRQQLLTEIRTLCESPCYEGLVEFHGAFYTPDSGQISIALEYMDGGSLADILRLKKCLPEHILSSMFRKLLRGLSYLHGVRHLVHRDIKPANLLVNLKGEPKITDFGISAGLENSMAMCATFVGTVTYMSPERIRNENYSYPADIWSLGLALFECGTGEFPYSAAEGPVNLMLQILEDPSPSPPKQKFSPEFCSFIDVCLQKDPDSRPTSDQLLSHPFITKYEDAQVDLESFVREVFDPTQRMKELADMLTIHYYLLMDGPNEFWNHTKDFYNGSSTLSFSGKQFTGPNEIFETLTNIQSTLAGEWPPEKIVHVVEKLQCRAHGPGGIAIRVWGSFIIGNQFLICGDGLQAEGIPNFKDLAIDVSSKRMGTFREQFVMEPSNVIGCYVIAKQELYITQVEN | 517 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3670629 | 3673912 | - | Conep03aG0073700.1 | Cone3ag0716 | 434175 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0716 | 517 | Gene3D | Phosphorylase Kinase; domain 1 | 73 | 154 | - | - | |
Cone3ag0716 | 517 | SMART | serkin_6 | 79 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0716 | 517 | ProSiteProfiles | Nuclear transport factor 2 domain profile. | 362 | 512 | IPR018222 | - | |
Cone3ag0716 | 517 | FunFam | mitogen-activated protein kinase kinase 3 | 51 | 160 | - | - | |
Cone3ag0716 | 517 | CDD | PKc_MAPKK_plant_like | 77 | 339 | - | - | |
Cone3ag0716 | 517 | SUPERFAMILY | Protein kinase-like (PK-like) | 81 | 355 | IPR011009 | - | |
Cone3ag0716 | 517 | ProSitePatterns | Protein kinases ATP-binding region signature. | 85 | 108 | IPR017441 | GO:0005524(InterPro) | |
Cone3ag0716 | 517 | Gene3D | Transferase(Phosphotransferase) domain 1 | 155 | 358 | - | - | |
Cone3ag0716 | 517 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 199 | 211 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone3ag0716 | 517 | Gene3D | - | 359 | 512 | - | - | |
Cone3ag0716 | 517 | PANTHER | DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED | 59 | 367 | - | GO:0000165(PANTHER)|GO:0004708(PANTHER) | |
Cone3ag0716 | 517 | ProSiteProfiles | Protein kinase domain profile. | 79 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag0716 | 517 | FunFam | mitogen-activated protein kinase kinase 3 | 161 | 357 | - | - | |
Cone3ag0716 | 517 | SUPERFAMILY | NTF2-like | 360 | 512 | IPR032710 | - | |
Cone3ag0716 | 517 | FunFam | Mitogen-activated protein kinase kinase 3 | 359 | 513 | - | - | |
Cone3ag0716 | 517 | Pfam | Protein kinase domain | 83 | 335 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag1378 | Cone-Chr20:8798189 | Cone3ag0716 | Cone-Chr3:3670629 | 2.25E-49 | dispersed | |
Cone3ag0716 | Cone-Chr3:3670629 | Cone7ag1164 | Cone-Chr7:8676600 | 3.18E-76 | dispersed | |
Cone10ag0698 | Cone-Chr10:3519546 | Cone3ag0716 | Cone-Chr3:3670629 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82681 | PF01612 | DNA_pol_A_exo1 | 8.70E-44 | CL0219 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0716 | K20607 | - | csv:101217978 | 859.366 |