Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0718 | ATGGCTTCTTCGGAACAACAGCACGACACCGTTTTCCCCGACGAAGACCTCGACGACGATGGCGCTTCGCTCGACGATGACGACGACGACGACGATGATGACGATGAGGAGGAAGAATTGGAATTGTTGAACGACGACGTCATCTCTCCTTCGCCTTCTACGTCATCTTTCGCCGCGGTCACCCTCGCTGATGCTGCTGCCACTGTCACTGTCGCGATTCCTAGCGCTGCCGTAGTTTCTAACTCTGTCCCTCCTAAATCCACCGCGACTACCGCATCAACTGTCGCTGCTAGTCCTTCCGATCTTAATAAACGGCCACGGTTTAATACTCCGACGTCAACGATGAAAATTGAGGCTGTGATTTTACCGCATGAGGAGAAGAAGCCGTTGGATGAGTCTCGGAAGCTTTTTCAACGGCTGTGGACCGATGAGGATGAGATCGAACTCTTACAAGGGTTTCTCGATTACACGACTCAGCGAGGATCCACTCAACATCACCAAAACGACACCGCTTTGTTCTACGATCAGATTAAATCCAAGCTTCAGCTGGATTTCAACAAGAATCAGCTTGTCGAGAAGCTTCGGAGGTTGAAGAAGAAGTATCGAAATGTTATGAGTAAGATCAGCTCCGGCAAAGAACTCAGTTTCAAAAGCGCTCACGATCATGCCACCTTTCAAATATCTCGCAAGATCTGGGGCGATACTGGCCGAATTGGAGCAGAGGATAATGCTCTAGATGATGAAGATCCCAATTCTAACCCTAATTTCCATCATATGGAACCAAAGGACGAGGAAATGGCGGGATATAGTGCAGAGAAGAAGGCAACAAGCACGCCAAGATCGAGGAAGCGATCCAGACCTGGATCAGGATTGAGAACCGAAGAAACAATGCCAGCTTCGAACGAGATTACAAACAGAGATAAGATATGTGTTGACAATAACAGCAATGTGAATAACATTTCAGGGGTCATTGAGGAGACAGTGAGAAGTTGTTTGTCTCCATTGTTCAAGGAGTTGTTGAATACTGCAATGGGAAATCCATGTGGGTCTAGGGCATATTCCGGATTGGCATCAAATCCTATACCCATGAGTTTCGGTCCAGGGTCGATGAATTTTGGGAGTGGAGGGGAAATTGTAGATGATAGATGGAGGAAGCAGCAGATTTTGGAGCTAGAGGTTTATTCAAAGCGGCTCGAGCTGGTTCAGGATCAAATCAAGGTGGCATTGGACGAATTGCGATCCACAGGAGGGAGGTGA | 1257 | 47.81 | MASSEQQHDTVFPDEDLDDDGASLDDDDDDDDDDDEEEELELLNDDVISPSPSTSSFAAVTLADAAATVTVAIPSAAVVSNSVPPKSTATTASTVAASPSDLNKRPRFNTPTSTMKIEAVILPHEEKKPLDESRKLFQRLWTDEDEIELLQGFLDYTTQRGSTQHHQNDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMSKISSGKELSFKSAHDHATFQISRKIWGDTGRIGAEDNALDDEDPNSNPNFHHMEPKDEEMAGYSAEKKATSTPRSRKRSRPGSGLRTEETMPASNEITNRDKICVDNNSNVNNISGVIEETVRSCLSPLFKELLNTAMGNPCGSRAYSGLASNPIPMSFGPGSMNFGSGGEIVDDRWRKQQILELEVYSKRLELVQDQIKVALDELRSTGGR | 418 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3677442 | 3679281 | + | Conep03aG0073900.1 | Cone3ag0718 | 434177 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0718 | 418 | MobiDBLite | consensus disorder prediction | 238 | 301 | - | - | |
Cone3ag0718 | 418 | Coils | Coil | 187 | 207 | - | - | |
Cone3ag0718 | 418 | MobiDBLite | consensus disorder prediction | 1 | 54 | - | - | |
Cone3ag0718 | 418 | Pfam | Glabrous-enhancer-binding protein-like family, DBD domain | 137 | 233 | IPR053932 | - | |
Cone3ag0718 | 418 | Coils | Coil | 391 | 411 | - | - | |
Cone3ag0718 | 418 | MobiDBLite | consensus disorder prediction | 12 | 44 | - | - | |
Cone3ag0718 | 418 | MobiDBLite | consensus disorder prediction | 81 | 109 | - | - | |
Cone3ag0718 | 418 | MobiDBLite | consensus disorder prediction | 251 | 270 | - | - | |
Cone3ag0718 | 418 | PANTHER | BNAANNG10740D PROTEIN-RELATED | 19 | 414 | IPR007592 | GO:0005634(PANTHER)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0718 | Cone-Chr3:3677442 | Cone8ag1459 | Cone-Chr8:11236887 | 5.87E-16 | dispersed | |
Cone1ag0501 | Cone-Chr1:4879588 | Cone3ag0718 | Cone-Chr3:3677442 | 1.40E-11 | transposed | |
Cone1ag1730 | Cone-Chr1:58078486 | Cone3ag0718 | Cone-Chr3:3677442 | 5.69E-42 | wgd | |
Cone10ag0700 | Cone-Chr10:3525920 | Cone3ag0718 | Cone-Chr3:3677442 | 6.80E-233 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45819 | PF02214 | BTB_2 | 2.50E-17 | CL0033 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0718 | - | - | - | 0.0 |