Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0730 | ATGTCCCTTACTAAAGCTCTTCAAGAACATAAGGAGAGAAGGAAGCGAGATAGTAATGCTATAATGACGATGGTGATTAAACGTTCGAAGCCTTCTCCTATCACGCACCAATCTAGACTTGGTACTGATGAGCTGTTTATGGCAATAGATCCTAATACTAAGCAACTCTTGTATTATGAGGATAAGGCGGACCAATCAAATGGGGCTCTTTATCTTGATAAGTCATTGCTTATGGATAATTCTTCCATCTCTCTTCATAACGATAAACAGGACTGCTATATAGACATCTGCTCCCCAGAAGTACTCAGCCTTTTCACCGACAATTTTGACTATCAACATCTTCGTCGACATTTTGTTAAGGGATTGCTTGTTGATGATATTATGGGTTACAAGATATTCACACATGAAATCCACTCTAGCTATGCTGCCAGAATTGATAATTTTCGAAGCTATGACACTGTTAGTAAGGACATAATACAACGGTGGACGTATCCGTTTGTACCAGATGTCATGTTCTTTGGAAATTCTGCAACTAGACTCGAAAGACGGGGGATGTATCGAGCATCAGAAGTAGGGCAATCACGTTCTGCACAGGTCGGTCCTTGCACCGTTATTGGAAACAATACCAAGATTGGGGATTACACCAAAATTTCAAATTCAGTTGTTGGGCAAGGGTGTACCGTTGGATCAAATGTATTTATAGAAGGTTCCTACATATGGGATAATGTTATCATTGAAGATGGATGCAAAGTAAGGCATGCAATAGTATGTGATGGAGTGAGTATAAAGTCCGGAGCAGAACTGAAACCTGGCGTAGTTTTGTCTTTCAAGGTTGTGACTAGGAACCAATTTATTGTTCCTTCGTATTCAAAAGTATCTTTGTTTCAGCAGCCAATAACGCAAGATAGTGATGAGGAGTTGGAGTATGCAGACAATAGCAGTGGCATTGTAGAAAGTACAATGGCGAACTCTACTGGAGAATTGACATCCCAAGCATCAGAGGCATATGAGCTTGGTACCGGAGGTGCTGGATATGTTTGGTCAATTTACGAAGGAACCCTAGAAGAAGAATGGAGGCATTCAGTGGCACCCATTCCAGCAGATAAACTTGCTGAGTTAATGCGAGCTACAGATGATGAGTTGGAATTAGCTCAAGATGGAAGCACTCTTCCCCCTTCAGGGGAGTTGAAACTTGACTCTAATGATTCAGATGAAGATGATAATGAAGACTCGCGGGATGATTATGCCTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTAAGGGCTGTACATGAAAATATTAGTGTGGACCATGTCATCCTAGAAGTAAACTCTTTGAGGTTGTCATATAATAAGGTAGCTGCGGACTGTGCTGGGGCAATATTTTATTCAGTGATGAAATTTGCATTGGACAGTCCTCATGGTTCGGCAACTGAGTTGTTTCAAATTGCTACTAGCATAATTACAAAATGGAAAAGGCTTCTAAAGTACTACCTTTCTGATGTGGATGATGAGATTGAAGTAATACTGAAATTTGAAGAGATGTGCCTGGAATCTGCAAAGGAATTTTCCCTACTTTTTACAAAGATTCTGTGGCATCTATACGACCAAGAAATCCTTCAAGAAGATGCTGTTTTAAGGTGGGATGATGAAAGGAAAGATGCAGATGAATCCGACAAAGTCTTTGTCAAGCAGTCTGAGAGTTTCATTCAATGGTTGAGAGAGGCATCTGAAGAAGATGACGATGAAGAAGAGTAA | 1758 | 40.39 | MSLTKALQEHKERRKRDSNAIMTMVIKRSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADQSNGALYLDKSLLMDNSSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIQRWTYPFVPDVMFFGNSATRLERRGMYRASEVGQSRSAQVGPCTVIGNNTKIGDYTKISNSVVGQGCTVGSNVFIEGSYIWDNVIIEDGCKVRHAIVCDGVSIKSGAELKPGVVLSFKVVTRNQFIVPSYSKVSLFQQPITQDSDEELEYADNSSGIVESTMANSTGELTSQASEAYELGTGGAGYVWSIYEGTLEEEWRHSVAPIPADKLAELMRATDDELELAQDGSTLPPSGELKLDSNDSDEDDNEDSRDDYAYFEKEVEATFLRAVHENISVDHVILEVNSLRLSYNKVAADCAGAIFYSVMKFALDSPHGSATELFQIATSIITKWKRLLKYYLSDVDDEIEVILKFEEMCLESAKEFSLLFTKILWHLYDQEILQEDAVLRWDDERKDADESDKVFVKQSESFIQWLREASEEDDDEEE | 585 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 3746210 | 3757636 | - | Conep03aG0075300.1 | Cone3ag0730 | 434189 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0730 | 585 | Pfam | Bacterial transferase hexapeptide (six repeats) | 203 | 236 | IPR001451 | - | |
Cone3ag0730 | 585 | SMART | 542_3 | 492 | 579 | IPR003307 | GO:0005515(InterPro) | |
Cone3ag0730 | 585 | FunFam | Trimeric LpxA-like enzyme | 179 | 312 | - | - | |
Cone3ag0730 | 585 | SUPERFAMILY | Trimeric LpxA-like enzymes | 131 | 285 | IPR011004 | - | |
Cone3ag0730 | 585 | CDD | W2_eIF2B_epsilon | 413 | 577 | IPR044123 | GO:0005085(InterPro)|GO:0031369(InterPro) | |
Cone3ag0730 | 585 | CDD | LbH_eIF2B_epsilon | 204 | 279 | - | - | |
Cone3ag0730 | 585 | ProSiteProfiles | W2 domain profile. | 412 | 583 | IPR003307 | GO:0005515(InterPro) | |
Cone3ag0730 | 585 | MobiDBLite | consensus disorder prediction | 383 | 411 | - | - | |
Cone3ag0730 | 585 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON | 1 | 585 | IPR051956 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER) | |
Cone3ag0730 | 585 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 2 | 232 | IPR029044 | - | |
Cone3ag0730 | 585 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 1 | 167 | IPR029044 | - | |
Cone3ag0730 | 585 | Pfam | eIF4-gamma/eIF5/eIF2-epsilon | 504 | 583 | IPR003307 | GO:0005515(InterPro) | |
Cone3ag0730 | 585 | SUPERFAMILY | ARM repeat | 418 | 576 | IPR016024 | - | |
Cone3ag0730 | 585 | Gene3D | Hexapeptide repeat proteins | 181 | 289 | - | - | |
Cone3ag0730 | 585 | Gene3D | - | 405 | 584 | - | - | |
Cone3ag0730 | 585 | FunFam | Translation initiation factor eIF-2B epsilon subunit | 408 | 584 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0711 | Cone-Chr10:3588012 | Cone3ag0730 | Cone-Chr3:3746210 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0730 | K03240 | - | csv:101217025 | 888.256 |