Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0730 ATGTCCCTTACTAAAGCTCTTCAAGAACATAAGGAGAGAAGGAAGCGAGATAGTAATGCTATAATGACGATGGTGATTAAACGTTCGAAGCCTTCTCCTATCACGCACCAATCTAGACTTGGTACTGATGAGCTGTTTATGGCAATAGATCCTAATACTAAGCAACTCTTGTATTATGAGGATAAGGCGGACCAATCAAATGGGGCTCTTTATCTTGATAAGTCATTGCTTATGGATAATTCTTCCATCTCTCTTCATAACGATAAACAGGACTGCTATATAGACATCTGCTCCCCAGAAGTACTCAGCCTTTTCACCGACAATTTTGACTATCAACATCTTCGTCGACATTTTGTTAAGGGATTGCTTGTTGATGATATTATGGGTTACAAGATATTCACACATGAAATCCACTCTAGCTATGCTGCCAGAATTGATAATTTTCGAAGCTATGACACTGTTAGTAAGGACATAATACAACGGTGGACGTATCCGTTTGTACCAGATGTCATGTTCTTTGGAAATTCTGCAACTAGACTCGAAAGACGGGGGATGTATCGAGCATCAGAAGTAGGGCAATCACGTTCTGCACAGGTCGGTCCTTGCACCGTTATTGGAAACAATACCAAGATTGGGGATTACACCAAAATTTCAAATTCAGTTGTTGGGCAAGGGTGTACCGTTGGATCAAATGTATTTATAGAAGGTTCCTACATATGGGATAATGTTATCATTGAAGATGGATGCAAAGTAAGGCATGCAATAGTATGTGATGGAGTGAGTATAAAGTCCGGAGCAGAACTGAAACCTGGCGTAGTTTTGTCTTTCAAGGTTGTGACTAGGAACCAATTTATTGTTCCTTCGTATTCAAAAGTATCTTTGTTTCAGCAGCCAATAACGCAAGATAGTGATGAGGAGTTGGAGTATGCAGACAATAGCAGTGGCATTGTAGAAAGTACAATGGCGAACTCTACTGGAGAATTGACATCCCAAGCATCAGAGGCATATGAGCTTGGTACCGGAGGTGCTGGATATGTTTGGTCAATTTACGAAGGAACCCTAGAAGAAGAATGGAGGCATTCAGTGGCACCCATTCCAGCAGATAAACTTGCTGAGTTAATGCGAGCTACAGATGATGAGTTGGAATTAGCTCAAGATGGAAGCACTCTTCCCCCTTCAGGGGAGTTGAAACTTGACTCTAATGATTCAGATGAAGATGATAATGAAGACTCGCGGGATGATTATGCCTACTTTGAGAAAGAGGTTGAAGCAACTTTTCTAAGGGCTGTACATGAAAATATTAGTGTGGACCATGTCATCCTAGAAGTAAACTCTTTGAGGTTGTCATATAATAAGGTAGCTGCGGACTGTGCTGGGGCAATATTTTATTCAGTGATGAAATTTGCATTGGACAGTCCTCATGGTTCGGCAACTGAGTTGTTTCAAATTGCTACTAGCATAATTACAAAATGGAAAAGGCTTCTAAAGTACTACCTTTCTGATGTGGATGATGAGATTGAAGTAATACTGAAATTTGAAGAGATGTGCCTGGAATCTGCAAAGGAATTTTCCCTACTTTTTACAAAGATTCTGTGGCATCTATACGACCAAGAAATCCTTCAAGAAGATGCTGTTTTAAGGTGGGATGATGAAAGGAAAGATGCAGATGAATCCGACAAAGTCTTTGTCAAGCAGTCTGAGAGTTTCATTCAATGGTTGAGAGAGGCATCTGAAGAAGATGACGATGAAGAAGAGTAA 1758 40.39 MSLTKALQEHKERRKRDSNAIMTMVIKRSKPSPITHQSRLGTDELFMAIDPNTKQLLYYEDKADQSNGALYLDKSLLMDNSSISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHEIHSSYAARIDNFRSYDTVSKDIIQRWTYPFVPDVMFFGNSATRLERRGMYRASEVGQSRSAQVGPCTVIGNNTKIGDYTKISNSVVGQGCTVGSNVFIEGSYIWDNVIIEDGCKVRHAIVCDGVSIKSGAELKPGVVLSFKVVTRNQFIVPSYSKVSLFQQPITQDSDEELEYADNSSGIVESTMANSTGELTSQASEAYELGTGGAGYVWSIYEGTLEEEWRHSVAPIPADKLAELMRATDDELELAQDGSTLPPSGELKLDSNDSDEDDNEDSRDDYAYFEKEVEATFLRAVHENISVDHVILEVNSLRLSYNKVAADCAGAIFYSVMKFALDSPHGSATELFQIATSIITKWKRLLKYYLSDVDDEIEVILKFEEMCLESAKEFSLLFTKILWHLYDQEILQEDAVLRWDDERKDADESDKVFVKQSESFIQWLREASEEDDDEEE 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3746210 3757636 - Conep03aG0075300.1 Cone3ag0730 434189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0730 585 Pfam Bacterial transferase hexapeptide (six repeats) 203 236 IPR001451 -
Cone3ag0730 585 SMART 542_3 492 579 IPR003307 GO:0005515(InterPro)
Cone3ag0730 585 FunFam Trimeric LpxA-like enzyme 179 312 - -
Cone3ag0730 585 SUPERFAMILY Trimeric LpxA-like enzymes 131 285 IPR011004 -
Cone3ag0730 585 CDD W2_eIF2B_epsilon 413 577 IPR044123 GO:0005085(InterPro)|GO:0031369(InterPro)
Cone3ag0730 585 CDD LbH_eIF2B_epsilon 204 279 - -
Cone3ag0730 585 ProSiteProfiles W2 domain profile. 412 583 IPR003307 GO:0005515(InterPro)
Cone3ag0730 585 MobiDBLite consensus disorder prediction 383 411 - -
Cone3ag0730 585 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 1 585 IPR051956 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0031369(PANTHER)
Cone3ag0730 585 SUPERFAMILY Nucleotide-diphospho-sugar transferases 2 232 IPR029044 -
Cone3ag0730 585 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 1 167 IPR029044 -
Cone3ag0730 585 Pfam eIF4-gamma/eIF5/eIF2-epsilon 504 583 IPR003307 GO:0005515(InterPro)
Cone3ag0730 585 SUPERFAMILY ARM repeat 418 576 IPR016024 -
Cone3ag0730 585 Gene3D Hexapeptide repeat proteins 181 289 - -
Cone3ag0730 585 Gene3D - 405 584 - -
Cone3ag0730 585 FunFam Translation initiation factor eIF-2B epsilon subunit 408 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0711 Cone-Chr10:3588012 Cone3ag0730 Cone-Chr3:3746210 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0730 K03240 - csv:101217025 888.256