Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0755 ATGGCTTCCTTCTCCTTCCCCTCTCTCAAATCCACCCTACTTTCCATAACAATCCTCTCAACCCTCATCTTCTTCTTTCTCACAACCCCCCTTCTAACCCCAAATCCACCCTCCCCTTCGTCCCCAATGCCTAAACGATCCCTAATCACCGCCTCCGCTTCAAATACATCTTGCGATTCCTTCTCTAATGGCCTCCTCAACTACTCTTCCTTTCATTCCTGCCTCTTCAATCAAAACCCATATCTCTCCATTCCCTCCCTCTCCCTCCTCCTCCTCCTCCACTTCTACATCCTCATCAAAACCGCTCAAGACCACTTCACCATCGTCACCACTAAGCTCGCTTCTCACCTCAACATGTCTCCAAGCATGGCAGCCGTGACTCTCTTAGCACTAGGCAATGGGGCTCCCGACGTGTTCGCATCAGTCGCCGCCGTTCGTGGGGGCCACTACCGCACCGGGTTCGGTGCGATTCTCTCTGCGGGTACTTTTGTTTCGGCTCTTGTTGTGGGGTTTGTTGCGATTTATGCCGCACCCTTTTCGGTTAATCCGGCTCCGTTTGTGAGGGATGTTTTGTTTTATCTGATTGCTGCTCTGTTCTTGTTCTATGTGTATCTTAGTGCTGAGATTTTTCTCTGGCAGGCTGTTGGGTTTGTTGGGTTTTATTTATTTTTTGTTGGGTTTGTGTTTTGGATGGATATTGGAATAATGGGTGGAGAAGGTAAAGGAGGAAAGGGTGGTGGAGTTGGAGAAATTGAGGGGCAGAGGGATCTTTTGACTGTTGATTATGAGATTGGTGAAGGTTTGAGAGATTTGGAAGGGGTGAAATCGGGATCGGGTTTTGGACAAGTTCTTGGAATGATATCTAAAGCATGGGAGTTCCCTGTTTCGTCTCTTCTAAAGCTCACGATACCTCAACCTTCGCCTACACAATGGAGCAGATTCTACACATCAGCCAATATCATTCTTTGCCCACTGGCCCTCTTATATTCTTGCAATTCATTTATACCTTTCAATTTTCCCATCATTTTCCTCCTTCCAAACATCCACTTCCCTCTCTGGTTCATAGTCCTCTTTGCCAGCTCCTCTCTTGCAATCCTCCACTTCATAATCGAAAAGGACCCACCAAAAACCGAGCAAGTCCCAATAGTCCTCACAGCGTTCATTATGAGCGTCTTCTGGATATCTACTACAGCTGGAGAGCTTCTAAACTGCCTTGCAGCCCTTGGGTCACTCCTCAACCTGCCCCCATCACTTCTCGGGCTAACAGTACTTGCATGGGGCAACTCGGTCGGAGACCTTGTTGCTGATGTGGCATTGGCGAAAGCAGGACATCCGTTATTGGCCATGGCGGGTTGCTTTGCAGGACCCATGTTCAATATGCTCATTGGGCTTGGAACAGCTTTGGTTATAGAGACGTCTAGTGTTTATCCGGAGGCCTATCATCTTCATTTCCATATGGGTATTGTTATCGCATTCATTTTTCTGCTTCTGAGCTTGATGGGATCTCTTTTAATTGTCACCTGGTGTAGATTCCGTGTACCGAGGTTTTGGGGATTCTGTCTTGTTGGCCTGTATGTTGTTTTTATGGCTGTTAGTTTACTGATTGCCGAGTTTTCCAGGTAA 1623 47.38 MASFSFPSLKSTLLSITILSTLIFFFLTTPLLTPNPPSPSSPMPKRSLITASASNTSCDSFSNGLLNYSSFHSCLFNQNPYLSIPSLSLLLLLHFYILIKTAQDHFTIVTTKLASHLNMSPSMAAVTLLALGNGAPDVFASVAAVRGGHYRTGFGAILSAGTFVSALVVGFVAIYAAPFSVNPAPFVRDVLFYLIAALFLFYVYLSAEIFLWQAVGFVGFYLFFVGFVFWMDIGIMGGEGKGGKGGGVGEIEGQRDLLTVDYEIGEGLRDLEGVKSGSGFGQVLGMISKAWEFPVSSLLKLTIPQPSPTQWSRFYTSANIILCPLALLYSCNSFIPFNFPIIFLLPNIHFPLWFIVLFASSSLAILHFIIEKDPPKTEQVPIVLTAFIMSVFWISTTAGELLNCLAALGSLLNLPPSLLGLTVLAWGNSVGDLVADVALAKAGHPLLAMAGCFAGPMFNMLIGLGTALVIETSSVYPEAYHLHFHMGIVIAFIFLLLSLMGSLLIVTWCRFRVPRFWGFCLVGLYVVFMAVSLLIAEFSR 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3918489 3920789 + Conep03aG0077800.1 Cone3ag0755 434214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0755 540 Pfam Sodium/calcium exchanger protein 88 230 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone3ag0755 540 Pfam Sodium/calcium exchanger protein 384 533 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
Cone3ag0755 540 Gene3D - 119 250 IPR044880 -
Cone3ag0755 540 Gene3D - 317 534 IPR044880 -
Cone3ag0755 540 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 57 536 IPR051359 GO:0006812(PANTHER)|GO:0008324(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0755 Cone-Chr3:3918489 Cone4ag0824 Cone-Chr4:5292461 1.42E-38 dispersed
Cone3ag0755 Cone-Chr3:3918489 Cone3ag0536 Cone-Chr3:2648837 1.37E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0755 K13754 - vvi:100256252 672.159