Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0774 ATGCAGGAACTCTTCGGATCAGTTCGCCGATCACTGGTTTTTCGTTCACCTGTCGAGAACGAGGAATCGCAGTCGCCGCCGTTTGGAGCAGGAGCTCTAGTCGATAAGATTCGTAAGTCCAGAGTTTTCTCCAAGTACTCTCCTCCTACTCTGCCTCCGATTCGGAAAGACAACGCGTCTAAGATCCGATGGCGCAAGGGAGAGTTGATCGGATGTGGCGCCTTTGGACGAGTGTATATGGGGATGAATCTTGATTCCGGAGAGCTTCTCGCTGTTAAACAGGTTCTGATCGCATCAAATGGAGCGTCAAAGGAGAAAGCACAGGATCATATCAAGGAGCTTGAGGAAGAGGTGAAACTTCTCAAGGATCTATCTCATCCAAACATTGTCAGATATTTGGGTACAGTGAGGGAGGAAGATTCCTTAAATATCTTGTTAGAATTTGTTCCTGGTGGATCCATATCATCACTTTTAGGGAAATTTGGAGCTTTCCCTGAAGCTGTTATAAGGACATATACAAGGCAGTTGTTGTTGGGTTTGGAATATTTGCACAAAAATGGTATCATGCACAGGGACATTAAGGGGGCAAATATTCTTGTAGATAATAAGGGATGCATTAAGGTTGCAGATTTTGGTGCATCAAAACAGGTGGTTAAGCTGGCTACCATTTCAGGTGCGAAGTCTATGAAGGGTACTCCATACTGGATGGCTCCAGAAGTGATTCTCCAGACTGGGCATAGCTTTTCTGCTGATATATGGAGTGTCGGATGTACTGTGATTGAGATGGCCACTGCAAAACCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCTCTCTTTCATATAGGGACAACAAAGTCTCACCCACCTATTCCTGACCATGTCTCTGTTGAAGCAGAAGATTTTCTGCTGAAATGTCTGGAGAAGGAACCAAACTCAAGGCCAACTACATCCGATTTGCTAAAGCATCCTTTTGTCACTGGAGAACAATCAAAATTCCAACCTGTTTTCCAAAATGCAGTCAGGGAGAATTCTGAAACCCCGTCACTCTCAGATGCCAAAACCCTCAGAACTCTGCAACCATCAGCATGTCTTGCCTCTACAGATGTCTGTAACTTGGGTAGTCGAACTAGATCAAACATTTATAGTGAGAAGTTGGGAGGCAATAATATATGGCGAACGAACAATAGCGATGATGAAATGTGTCAAATTGATGATAAAGATCATTTTATGTTGGATGATGTAAAGCTCGGTTCATCTGTTATGGCCGAAAATTTTAAGAGCTATAACCCAATGTGTGAGCCCTCTGATAATTGGGAGACAAAATTTCACAAAGGCCCGGAAGTGGAACAAAGAGGAATTAACTCGGGCTCCAATCAACAAGTGCACGAGCCCAGTAGCCACTCAGGAGGTTTTGACAAGCAGGACAGAGAGTTTTCATTTCCTTCTGGAAGATCACTTTCTGAAGATGAGGATGAACTTACTGAGTCAAAAATTACTGCCTTCTTGGACGAAAAGGCTCTTGAATTGAAGAAACTGCAGACACCTCTATATGAAGAATTCTTCAACAGCTTAAATGTAGGTTGCTCTTCAGGTTTTGTTGAAACCACACGAGATGAGAATACTCCTAAGTACTTGAAACTGCCTCTTAAAGGCAGATCCCCAAATCGAGGACCATGTAATCAACCTGTTACGGGTGATGCTTTCGGAAATAGAAGCCCAGGGAGTAATAGCAGATGCGCATCAAATACAAGCAATGTAGATAATTATAAAGGCTCGGATGACATTACATCACCTCCTATTAATGATAAAAAGGGGATTCTAACTGATGGTCCTCCAGAACCAACCAGTCCAAGTGTGCACTTCTCCGAGATACAGAAGAAATGGAAAGAAGAGCTTGACCAAGAGCTTGAGAGAAAACGAGAGATGATGCGCCAAGCGGGTGGGAAAACATCATCGCCCAAGGATCGAACAATAAGCAGGCAAAGAGAATTAACGAGATTTGCATCTCCGGGAAAATAA 2022 43.57 MQELFGSVRRSLVFRSPVENEESQSPPFGAGALVDKIRKSRVFSKYSPPTLPPIRKDNASKIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIASNGASKEKAQDHIKELEEEVKLLKDLSHPNIVRYLGTVREEDSLNILLEFVPGGSISSLLGKFGAFPEAVIRTYTRQLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKVADFGASKQVVKLATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATAKPPWSQQYQEVAALFHIGTTKSHPPIPDHVSVEAEDFLLKCLEKEPNSRPTTSDLLKHPFVTGEQSKFQPVFQNAVRENSETPSLSDAKTLRTLQPSACLASTDVCNLGSRTRSNIYSEKLGGNNIWRTNNSDDEMCQIDDKDHFMLDDVKLGSSVMAENFKSYNPMCEPSDNWETKFHKGPEVEQRGINSGSNQQVHEPSSHSGGFDKQDREFSFPSGRSLSEDEDELTESKITAFLDEKALELKKLQTPLYEEFFNSLNVGCSSGFVETTRDENTPKYLKLPLKGRSPNRGPCNQPVTGDAFGNRSPGSNSRCASNTSNVDNYKGSDDITSPPINDKKGILTDGPPEPTSPSVHFSEIQKKWKEELDQELERKREMMRQAGGKTSSPKDRTISRQRELTRFASPGK 673
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 3980942 3985657 + Conep03aG0079700.1 Cone3ag0774 434233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0774 673 MobiDBLite consensus disorder prediction 452 468 - -
Cone3ag0774 673 FunFam Serine/threonine-protein kinase STE11 60 154 - -
Cone3ag0774 673 CDD STKc_MAPKKK 63 326 - -
Cone3ag0774 673 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 47 330 IPR050538 -
Cone3ag0774 673 FunFam Mitogen-activated protein kinase kinase kinase 2 63 355 - -
Cone3ag0774 673 SMART serkin_6 64 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0774 673 SUPERFAMILY Protein kinase-like (PK-like) 63 352 IPR011009 -
Cone3ag0774 673 Coils Coil 97 124 - -
Cone3ag0774 673 Gene3D Transferase(Phosphotransferase) domain 1 61 360 - -
Cone3ag0774 673 Coils Coil 626 650 - -
Cone3ag0774 673 Pfam Protein kinase domain 65 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0774 673 MobiDBLite consensus disorder prediction 449 494 - -
Cone3ag0774 673 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524(InterPro)
Cone3ag0774 673 MobiDBLite consensus disorder prediction 469 494 - -
Cone3ag0774 673 MobiDBLite consensus disorder prediction 558 596 - -
Cone3ag0774 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag0774 673 MobiDBLite consensus disorder prediction 638 673 - -
Cone3ag0774 673 ProSiteProfiles Protein kinase domain profile. 64 326 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag0774 673 MobiDBLite consensus disorder prediction 547 626 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0732 Cone-Chr11:5080800 Cone3ag0774 Cone-Chr3:3980942 2.23E-64 dispersed
Cone3ag0774 Cone-Chr3:3980942 Cone4ag0218 Cone-Chr4:999361 3.05E-241 dispersed
Cone10ag0732 Cone-Chr10:3706157 Cone3ag0774 Cone-Chr3:3980942 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82682 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0774 K20606 - csv:101209358 881.322