Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0820 ATGGGATTAATCGACATGTCGTCTGAAACAGAAAGGTTGATTTCTACTGTGGAAACGCGGCCGGAGTTGTTGCAAGTGTCTAATTCTTTCCGGCGATGCGGCGGCGGAGATCCGCCGAGGATTTTCGAGGAGTTGCCAAAAGCCAGTATTGTCTCAGTTTCCCGGCCAGATACTGGAGATATTAGCCCCATGCTTTTATCATACACGATTGATATTCAATACAAACAGTTCAAATGGCAATTAGTGAAGAAAGCATCCCAAGTTCTATATCTACATTTTGCATTGAAGAAACGCACAATTATCGAAGATCTTCATGAGAAACAAGAGCAGGTTAGAGAATGGCTTCAAAGCATCGGTATTGTAGAAAACATGGCAGTGGTTCAAGATGTTGACGAACCCGATGACGGAGCTTTCCCTTTACATAACGATGGTAGTGCGAGAAACAGAAATATTCCGTCTATTGCTGCATTGCCAATTATCCGGCCAGCTCTTGGAGGGCAGCAATCTATCTCAGACCAGGCTAAGTCAGCAATGCAAGGTTATTTGAATCATTTCCTCGGAAACATGGATATAGTTAATTCTCGGGAGGTTTGTAAATTTTTAGAGGTTTCCAAGATGTCATTTTTACGAGAATATGGTCCGAAGTTGAAAGAAGGTTACTTAATGGTGAAGCATTTAAAGAAACTTGGAAGGCCCGATTCGGGTGTAAAGTGCTGTCTGTTAAATTGCTTCGACTGCATAGAGGACAAATGGGAGAAGGTGTGGGCTGTTTTAAAACCGGGTTTCTTGGCCTTGTTAGACGACCCTTTCGACACGAAACTCTTAGACATAATTGTTTTCGATATACTTCCAATAACAAATATGAACAAAGGAGGGTCCCATGTATATTTAGCAAATCATGTCAAGGAGAGAAACCCTTTACGCTATTCATTTAAGGTTACAAGTGGGAACGGGACCATAAAGTTGAGAACAACAAGTAGTGGAAAGGTCAAAGATTGGGTCACTGCAGTTAATGATGCGAGTTTGAGGCCACAAGATGGTTGGTGTCATCCTCATAGGTTCGAATCTTTTGCTCCTCAAAGAGGACTAAACGATGATGAGAGCCAGGCTCAATGGTTTATCGATGGAAAAGCTGCCTTTGAAGCCATTGCTTCTTCTATCAAAGATGCAAAATTCGAGATATTTATTACGGGGTGGTGGCTTTGCCCTGAGCTTTACTTGAGACGTCCTTTCCGGAATCATTCTTCCGAACGGCTCGATGCATTGTTAGAAAAGAAAGCAAAGGAAGGAGTTCAGATTCACATACTTCTTTACAAGGAGGTTCCTATTGCTTTGAAAATCAACAGTATGTATAGTAAGAAGAGGCTTCTAAACATTCATAAGAATGTTCGGGTACTCCGTTACCCAGACCATATGTCTACCGGGGTGTATTATTGGTCACACCATGAAAAACTTGTAATAGTTGATTATCAGATTTGCTTTATTGGAGGTTTGGATTTATGCTTCGGCCGCTATGACACAATGGATCATAAAGTGGGTGATTTCCCGGCTCGTATTTGGCCCGGAAAAGATTATTATAACCCTAGAGAATCTGAACCAAATTCTTGGGAAGATACGATGAGAGATGAACTGAACCGGAAAAAATATCCGAGAATGCCTTGGCATGATGTTCATTGCGCTCTGTCAGGCCCACCTTGCCGTGATATCGCTCGGCATTTTGTTCAGCGTTGGAATCATGCTAAGAAAAACAAAGCACCAAACGAACAAACTATACCTCTACTTATGCCACATCACCATAGAGTCCTCCCTCATTATATGGGAAGAAGCAAGGAGAGAGACATTCAAAGCTCAGATCATGAACTAAAACAAAACAGTGTTAAAAAACTGTGTTCTTCAGACTCCTTTTCATCCTGTTCTCCAGTGCAAGATATCCCATTACTTCTTCCTCAAGAAGCTGATGGATCACCAGATTCTGATGCACGGAAAAAGTCAAATGGCTTGAATCTTCTTGATCAGCCAATAGAAAAAGTTGTACCTCCTAAGGAACAGAGGAATGGTGTGGTTGAAGATTTTGATATGATGGATCTCGAAAGTGAATCAGTATCAGATGAAGTGGCAGATGAATCTGGTAGTCCTATTACTGACGAGGAGGATGACATAGGACAAGTGGGTCCCCAGACTTCATGCCGTTGTCAGGTGGTTAGAAGTGTCAGCCAATGGTCAGCTGGAACTGGTAATCCGGAAGGAAGCATTCACAGTGCTTACTGTTCTCTGATTGACAAGGCGGATCATTTTATTTACATTGAGAATCAATTTTTCATATCGGGTCTTTCCGGGGATGAATCAATTCTGAACCGTGTCTTAGAATCACTATACAGACGAATCTTACGAGCAGACAAAGAACAACAATGTTTTAGAGTCATTATAGTCTTACCACTCTTACCCGGATTCCAGGGTGGCGTCGATGATTTTGGTGCAGCAACTGTTAGAGCCTTAATGCATTGGCAATACCGAACAATTAGCTGGCCCAAGACTTCATTACTGTACAATCTCAATACTTTACTCGGCCCGAAAACAGAAGATTACATTTCATTCTACGGCTTGAGATCTTATGGTCGACTTTTTGAAAACGGTCCCATAGCCACTAGTCAGGTGTATGTGCATAGTAAAGTGATGATTATTGATGATCAGATTGCTATGATTGGATCCTCAAACATTAATGATAGGAGTTTGCTTGGATATAGGGACTCTGAGATTGGGGTGATTTTTGAAGATAAAGAGTTTGTTGACTCGTCAATGAATGGAAAATCTTGGAGGGCCGGGAAATTTGCTTATAGTCTTCGGTGCTCGTTATGGTCCGAGCATCTTGGTCTCAAAGCAGAAGAGATTGATCGAATTAGTGATCCGGTAGTTGAAACAACATACAAAGATCTATGGTTAGCAACTGCTAAGGAAAATACCCGGGTCTATCAAGACATCTTTGCTTGCATCCCAAATGACAGTATAAACTCAAGAGCTACATTAAGACAAAGCAGGAGCTATTGGAAGGAGAAACTCGGGCACACAACCATTGATTTAGGGATAGCATGCGAGAAGGTCGAAGAAGTAGACAACAATGGCGTAGTAATGGTCAAGGAAATAGACACAATGGAGAGATTGAAGAATACAGTGAGGGGACACCTTGTTTGTTTCCCACTAAACTTCATGCTTCTAGAAGATGATTTAAGACCAGCCTTCAATGAGACTGAATTCTATGCTGCTCAAGAAGTTTTTCATTAA 3279 41.63 MGLIDMSSETERLISTVETRPELLQVSNSFRRCGGGDPPRIFEELPKASIVSVSRPDTGDISPMLLSYTIDIQYKQFKWQLVKKASQVLYLHFALKKRTIIEDLHEKQEQVREWLQSIGIVENMAVVQDVDEPDDGAFPLHNDGSARNRNIPSIAALPIIRPALGGQQSISDQAKSAMQGYLNHFLGNMDIVNSREVCKFLEVSKMSFLREYGPKLKEGYLMVKHLKKLGRPDSGVKCCLLNCFDCIEDKWEKVWAVLKPGFLALLDDPFDTKLLDIIVFDILPITNMNKGGSHVYLANHVKERNPLRYSFKVTSGNGTIKLRTTSSGKVKDWVTAVNDASLRPQDGWCHPHRFESFAPQRGLNDDESQAQWFIDGKAAFEAIASSIKDAKFEIFITGWWLCPELYLRRPFRNHSSERLDALLEKKAKEGVQIHILLYKEVPIALKINSMYSKKRLLNIHKNVRVLRYPDHMSTGVYYWSHHEKLVIVDYQICFIGGLDLCFGRYDTMDHKVGDFPARIWPGKDYYNPRESEPNSWEDTMRDELNRKKYPRMPWHDVHCALSGPPCRDIARHFVQRWNHAKKNKAPNEQTIPLLMPHHHRVLPHYMGRSKERDIQSSDHELKQNSVKKLCSSDSFSSCSPVQDIPLLLPQEADGSPDSDARKKSNGLNLLDQPIEKVVPPKEQRNGVVEDFDMMDLESESVSDEVADESGSPITDEEDDIGQVGPQTSCRCQVVRSVSQWSAGTGNPEGSIHSAYCSLIDKADHFIYIENQFFISGLSGDESILNRVLESLYRRILRADKEQQCFRVIIVLPLLPGFQGGVDDFGAATVRALMHWQYRTISWPKTSLLYNLNTLLGPKTEDYISFYGLRSYGRLFENGPIATSQVYVHSKVMIIDDQIAMIGSSNINDRSLLGYRDSEIGVIFEDKEFVDSSMNGKSWRAGKFAYSLRCSLWSEHLGLKAEEIDRISDPVVETTYKDLWLATAKENTRVYQDIFACIPNDSINSRATLRQSRSYWKEKLGHTTIDLGIACEKVEEVDNNGVVMVKEIDTMERLKNTVRGHLVCFPLNFMLLEDDLRPAFNETEFYAAQEVFH 1092
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4208748 4215155 + Conep03aG0084800.1 Cone3ag0820 434279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0820 1092 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824(InterPro)
Cone3ag0820 1092 MobiDBLite consensus disorder prediction 703 722 - -
Cone3ag0820 1092 CDD PH_PLD 192 340 - -
Cone3ag0820 1092 Gene3D - 214 345 IPR011993 -
Cone3ag0820 1092 SUPERFAMILY Phospholipase D/nuclease 723 931 - -
Cone3ag0820 1092 Gene3D Endonuclease Chain A 711 946 - -
Cone3ag0820 1092 ProSiteProfiles PH domain profile. 214 342 IPR001849 -
Cone3ag0820 1092 Pfam Phospholipase D Active site motif 479 504 IPR001736 GO:0003824(InterPro)
Cone3ag0820 1092 SMART PH_update 215 344 IPR001849 -
Cone3ag0820 1092 SUPERFAMILY Phospholipase D/nuclease 331 600 - -
Cone3ag0820 1092 SMART pld_4 883 910 IPR001736 GO:0003824(InterPro)
Cone3ag0820 1092 SMART pld_4 477 504 IPR001736 GO:0003824(InterPro)
Cone3ag0820 1092 MobiDBLite consensus disorder prediction 648 669 - -
Cone3ag0820 1092 Gene3D Endonuclease Chain A 362 604 - -
Cone3ag0820 1092 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 883 910 IPR001736 GO:0003824(InterPro)
Cone3ag0820 1092 PANTHER PHOSPHOLIPASE D 195 1069 IPR015679 GO:0004630(PANTHER)|GO:0005886(PANTHER)|GO:0009395(PANTHER)
Cone3ag0820 1092 PIRSF PLD_euk 47 1092 IPR016555 GO:0004630(InterPro)|GO:0006654(InterPro)|GO:0035556(InterPro)
Cone3ag0820 1092 SUPERFAMILY PH domain-like 211 343 - -
Cone3ag0820 1092 CDD PLDc_vPLD1_2_yPLD_like_2 743 927 - -
Cone3ag0820 1092 Pfam PLD-like domain 884 930 IPR025202 -
Cone3ag0820 1092 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Cone3ag0820 1092 FunFam Phospholipase 716 937 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0820 Cone-Chr3:4208748 Cone9ag1632 Cone-Chr9:11614724 3.67E-36 dispersed
Cone10ag0798 Cone-Chr10:4048817 Cone3ag0820 Cone-Chr3:4208748 0 wgd
Cone14ag0747 Cone-Chr14:4169913 Cone3ag0820 Cone-Chr3:4208748 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0820 K01115 - mdm:103433898 1544.25