Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0838 ATGGGTGTGTTGAGTGAGGGAACAACACAGGTATTGATACCTTTAGCTGCGTTAGTCGGGATTGGATTTTCTCTGCTTCAATGGTTTTTTGTATCAAGAGTTAAGGTCTCTGGTAATTCTTCTGATGATGGTTATAAAGACTTCTTGATTGAAGGAGAAGAAGAAGAAGGTGTTGATAATTTTGAGGTTTCTATCAAGTGTGCGGAAATCCAGAATGCCATCTCTGTTGGGGCGACTTCGTTTCTATTTACCCAGTATCGATACCTCGGAATCTTCGTGGGAGCATTTAGTGTTATCATATTCCTCTTCCTCGGATCTGTAAAGGGCTTTAGCACAGAAAGCGAACCATGCACTTATAACACGGGAAACATTTGCAAACCTGCTTTAGCCAATGCCTTCTTCACCACCCTTGCCTTCTTGTTAGGTGCTCTAACCTCGGTCCTTTCCGGTTTTCTCGGGATGAAAATCGCAACCTATGCTAATGCTAGAACTACTCTAGAAGCAAGAAAAGGAGTCGGAAAAGCATTCATCACAGCTTTTCGGTCTGGTGCCGTTATGGGATTTCTTTTAGCTGCAAATGGCCTTTTGGTTTTGTTCGTATCCATTCACTTGTTCAAGCTTTACTATGGTGAGGATTGGGAGGGATTGTATGAATCGATTACGGGTTATGGCCTTGGAGGTTCTTCAATGGCTCTTTTTGGTAGAGTTGGTGGAGGTATTTACACAAAAGCAGCTGATGTTGGTGCTGATCTTGTTGGAAAAGTTGAACGGAATATTCCGGAAGATGATCCAAGAAACCCAGCTGTGATAGCAGATAATGTTGGAGACAATGTGGGAGACATAGCAGGGATGGGCTCTGATCTATTCGGATCTTATGCGGAATCATCATGTGCTGCTCTCTTTGTTGCATCAATCTCTTCCTTTGGAATTTCTCATGACTATTCAGCCATGTCTTATCCTCTAATTATAAGCTCCATGGGTATTGTTGTTTGCTTGATAACAACACTTTTTGCGACCGATCTGTTCGAGATCAAGTCTGTGAGTGAGATCGAACCAACCTTAAAAAGGCAGCTTCTTATCTCAACTGTCTTGATGACTGCCGGGATTGCCATGGTTACCTTCCTTGCCTTGCCATCAGAATTCACTCTCTACAATTTCGGAACCGAAAAAGTCGTAAAGAATTGGCACCTATTCTTCTGTGTCTCAATTGGGTTATGGGCAGGACTTGTTATTGGATATATAACTGAGTATTACACTAGCAATGCTTACAGTCCTGTGCAAGATGTAGCTGATTCTTGTAGAACCGGTGCTGCTACAAATGTGATTTTCGGGTTGGCTTTGGGTTATAAGTCGGTCATCATTCCAATATTTGCAATCGCCATTGCTATTTATGTGAGCTTCAGCTTGGCGGCTATGTACGGGATTTCTGTGGCTGCTTTGGGAATGCTTAGTACTATTGCAACCGGTCTTGCAATCGATGCTTATGGACCCATAAGCGATAATGCCGGTGGAATTGCCGAAATGGCTGGAATGAGCCACGAGATTCGTGAGAGAACCGACGCTTTAGATGCTGCCGGTAACACGACTGCTGCCATTGGAAAGGTTGAAAACTCTTTAATTGCAAAGTTAAGGGGTTTTGCGATTGGATCGGCTGCTCTTGTTTCACTTGCTCTATTTGGTGCATTTGTGAGTCGAGCAGGGATTAAAACGGTTGATGTTTTGACCCCGAAAGTTTTTATCGGGTTGATTGTGGGTGCTATGCTTCCATATTGGTTTTCGGCCATGACCATGAAGAGCGTGGGTAGTGCAGCTCTCAAGATGGTAGAAGAAGTTCGTAGACAATTCAATACTATCCCGGGTTTGATGGAAGGAACAGCAAAACCGGATTATGCCACTTGTGTGAAAATCTCTACCGATGCTTCACTCAGGGAGATGATCCCGCCCGGTGCTTTGGTTATGCTCACACCCCTTATTGCCGGAACCTTCTTCGGAGTTGAAACCCTTTCTGGGGTCTTAGCCGGTTCCCTTGTTTCCGGTGTGCAGGTAGCCATCTCTGCTTCAAATACGGGCGGAGCATGGGACAATGCGAAAAAATACATAGAGGCTGGTGGAAACGAGCATGCTAAGGCACTAGGCCCTAAGGGTTCCGATGCTCACAAGGCGGCCGTGATAGGAGACACAATTGGGGATCCTCTGAAGGACACTTCGGGTCCTTCACTCAATATCCTCATCAAGCTTATGGCGGTTGAGTCCTTAGTTTTTGCGCCGTTTTTCGCAGCTCATGGAGGGTTGATCTTCAAATGGCTGTAA 2310 44.89 MGVLSEGTTQVLIPLAALVGIGFSLLQWFFVSRVKVSGNSSDDGYKDFLIEGEEEEGVDNFEVSIKCAEIQNAISVGATSFLFTQYRYLGIFVGAFSVIIFLFLGSVKGFSTESEPCTYNTGNICKPALANAFFTTLAFLLGALTSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLFVSIHLFKLYYGEDWEGLYESITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALFVASISSFGISHDYSAMSYPLIISSMGIVVCLITTLFATDLFEIKSVSEIEPTLKRQLLISTVLMTAGIAMVTFLALPSEFTLYNFGTEKVVKNWHLFFCVSIGLWAGLVIGYITEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAIAIYVSFSLAAMYGISVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHEIRERTDALDAAGNTTAAIGKVENSLIAKLRGFAIGSAALVSLALFGAFVSRAGIKTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGTAKPDYATCVKISTDASLREMIPPGALVMLTPLIAGTFFGVETLSGVLAGSLVSGVQVAISASNTGGAWDNAKKYIEAGGNEHAKALGPKGSDAHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFAAHGGLIFKWL 769
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4287110 4291046 - Conep03aG0086700.1 Cone3ag0838 434297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0838 769 PIRSF H+-PPtase 12 767 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone3ag0838 769 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 8 767 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone3ag0838 769 Pfam Inorganic H+ pyrophosphatase 65 754 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone3ag0838 769 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 7 759 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
Cone3ag0838 769 NCBIfam V-type H(+)-translocating pyrophosphatase 9 764 IPR004131 GO:0004427(InterPro)|GO:0009678(InterPro)|GO:0016020(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0241 Cone-Chr17:1138676 Cone3ag0838 Cone-Chr3:4287110 0 dispersed
Cone20ag1170 Cone-Chr20:7893649 Cone3ag0838 Cone-Chr3:4287110 0 dispersed
Cone3ag0838 Cone-Chr3:4287110 Cone7ag0605 Cone-Chr7:2923857 0 dispersed
Cone10ag0813 Cone-Chr10:4122367 Cone3ag0838 Cone-Chr3:4287110 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0838 K23025 - mdm:103423547 1335.09