Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0845 | ATGGGAAACTTTCAACAAGAAGAAACTAGCACTCTGGTACAAGTCATCTGTGAGTTATACGAGCAAATCTCAAGCCTAGACAGCCTCAAACCCTCCGAAAATGTCAACACCCTCTTCACCAAACTTGTTCACACATGCATCCCACCCGCCCCTCATCTCAACATCACAAATTTACCCAAAAATGTTCAAGAAATAAGGTCTAAACTCATTAGACTATGTGGAGAGGCAGAAGGGTTTCTAGAATCTCATTTCTCAACAATTTTAGCTTCCTATAAAAACCCAATTGAAAACCTAAACCTTTTCCCTTACTACAACAATTACCTCAAACTTAGCCTCCTTGAGTTCAATATTCTCACCAAATATTGCACTCAAACCCCTAACAAGATTGCCTTTGTGGGTTCTGGCCCTCTCCCTCTTACCTCAATTGTCCTAGCCCTAAACTATCTTCCCACAACATCTTTTCACAATTATGATATCGACCCACTTGCCAATTCTAAGGCTATTAGCCTAATACCACCTCATCATGATTTGGCGAACCGTATGTTTTTTCATACTAGTGATGTTTTGGATGTGATTGAGGGTTTGAAGGAGTACGATGTTGTCTTTTTGGCTGCTCTGGTAGGGTTGAATAAGGAAGAGAAAGTTAGAGTTATAGAGCATTTGGCCAAGTATATGGTTCCTGGGGCTTATTTGATGCTGAGGAGCGCTCAAGGTGCTAGGGCTTTTCTTTATCCGGTGGTTGATGCTTGTGATCTTAACCCAGGGTTTGAGGTTCTTACTCTCTTTCATCCTACTGATGAAGTTATAAACTCTGTTGTTCTTGCACGTAAAGCTCCGGTAATGGCACCGCCTATCGAGTTGAATGTCGCTGATCATCATGAGAAGGGGAATAACATGAACTCAATCTGCATATTCCCTTACAACTGTTCCCATGATCATGGGATTCAAGCTTTCAATCACTTGAATATGATTGAGGAATTTGCCACGGAGGAGCAACTTTCCTAA | 1005 | 41.49 | MGNFQQEETSTLVQVICELYEQISSLDSLKPSENVNTLFTKLVHTCIPPAPHLNITNLPKNVQEIRSKLIRLCGEAEGFLESHFSTILASYKNPIENLNLFPYYNNYLKLSLLEFNILTKYCTQTPNKIAFVGSGPLPLTSIVLALNYLPTTSFHNYDIDPLANSKAISLIPPHHDLANRMFFHTSDVLDVIEGLKEYDVVFLAALVGLNKEEKVRVIEHLAKYMVPGAYLMLRSAQGARAFLYPVVDACDLNPGFEVLTLFHPTDEVINSVVLARKAPVMAPPIELNVADHHEKGNNMNSICIFPYNCSHDHGIQAFNHLNMIEEFATEEQLS | 334 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4328238 | 4329242 | + | Conep03aG0087500.1 | Cone3ag0845 | 434304 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0845 | 334 | CDD | AdoMet_MTases | 158 | 233 | - | - | |
Cone3ag0845 | 334 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 1 | 288 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone3ag0845 | 334 | Gene3D | Vaccinia Virus protein VP39 | 10 | 279 | IPR029063 | - | |
Cone3ag0845 | 334 | Pfam | Nicotianamine synthase protein | 6 | 280 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone3ag0845 | 334 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 139 | 259 | IPR029063 | - | |
Cone3ag0845 | 334 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 4 | 282 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag0845 | Cone-Chr3:4328238 | Cone5ag0076 | Cone-Chr5:365771 | 1.77E-141 | dispersed | |
Cone1ag1552 | Cone-Chr1:57389062 | Cone3ag0845 | Cone-Chr3:4328238 | 5.50E-79 | wgd | |
Cone10ag0819 | Cone-Chr10:4161491 | Cone3ag0845 | Cone-Chr3:4328238 | 6.90E-216 | wgd | |
Cone3ag0845 | Cone-Chr3:4328238 | Cone5ag0075 | Cone-Chr5:361880 | 8.66E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0845 | K05953 | - | cit:102621359 | 397.127 |