Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0845 ATGGGAAACTTTCAACAAGAAGAAACTAGCACTCTGGTACAAGTCATCTGTGAGTTATACGAGCAAATCTCAAGCCTAGACAGCCTCAAACCCTCCGAAAATGTCAACACCCTCTTCACCAAACTTGTTCACACATGCATCCCACCCGCCCCTCATCTCAACATCACAAATTTACCCAAAAATGTTCAAGAAATAAGGTCTAAACTCATTAGACTATGTGGAGAGGCAGAAGGGTTTCTAGAATCTCATTTCTCAACAATTTTAGCTTCCTATAAAAACCCAATTGAAAACCTAAACCTTTTCCCTTACTACAACAATTACCTCAAACTTAGCCTCCTTGAGTTCAATATTCTCACCAAATATTGCACTCAAACCCCTAACAAGATTGCCTTTGTGGGTTCTGGCCCTCTCCCTCTTACCTCAATTGTCCTAGCCCTAAACTATCTTCCCACAACATCTTTTCACAATTATGATATCGACCCACTTGCCAATTCTAAGGCTATTAGCCTAATACCACCTCATCATGATTTGGCGAACCGTATGTTTTTTCATACTAGTGATGTTTTGGATGTGATTGAGGGTTTGAAGGAGTACGATGTTGTCTTTTTGGCTGCTCTGGTAGGGTTGAATAAGGAAGAGAAAGTTAGAGTTATAGAGCATTTGGCCAAGTATATGGTTCCTGGGGCTTATTTGATGCTGAGGAGCGCTCAAGGTGCTAGGGCTTTTCTTTATCCGGTGGTTGATGCTTGTGATCTTAACCCAGGGTTTGAGGTTCTTACTCTCTTTCATCCTACTGATGAAGTTATAAACTCTGTTGTTCTTGCACGTAAAGCTCCGGTAATGGCACCGCCTATCGAGTTGAATGTCGCTGATCATCATGAGAAGGGGAATAACATGAACTCAATCTGCATATTCCCTTACAACTGTTCCCATGATCATGGGATTCAAGCTTTCAATCACTTGAATATGATTGAGGAATTTGCCACGGAGGAGCAACTTTCCTAA 1005 41.49 MGNFQQEETSTLVQVICELYEQISSLDSLKPSENVNTLFTKLVHTCIPPAPHLNITNLPKNVQEIRSKLIRLCGEAEGFLESHFSTILASYKNPIENLNLFPYYNNYLKLSLLEFNILTKYCTQTPNKIAFVGSGPLPLTSIVLALNYLPTTSFHNYDIDPLANSKAISLIPPHHDLANRMFFHTSDVLDVIEGLKEYDVVFLAALVGLNKEEKVRVIEHLAKYMVPGAYLMLRSAQGARAFLYPVVDACDLNPGFEVLTLFHPTDEVINSVVLARKAPVMAPPIELNVADHHEKGNNMNSICIFPYNCSHDHGIQAFNHLNMIEEFATEEQLS 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4328238 4329242 + Conep03aG0087500.1 Cone3ag0845 434304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0845 334 CDD AdoMet_MTases 158 233 - -
Cone3ag0845 334 PANTHER NICOTIANAMINE SYNTHASE 3 1 288 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone3ag0845 334 Gene3D Vaccinia Virus protein VP39 10 279 IPR029063 -
Cone3ag0845 334 Pfam Nicotianamine synthase protein 6 280 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone3ag0845 334 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 139 259 IPR029063 -
Cone3ag0845 334 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 4 282 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0845 Cone-Chr3:4328238 Cone5ag0076 Cone-Chr5:365771 1.77E-141 dispersed
Cone1ag1552 Cone-Chr1:57389062 Cone3ag0845 Cone-Chr3:4328238 5.50E-79 wgd
Cone10ag0819 Cone-Chr10:4161491 Cone3ag0845 Cone-Chr3:4328238 6.90E-216 wgd
Cone3ag0845 Cone-Chr3:4328238 Cone5ag0075 Cone-Chr5:361880 8.66E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0845 K05953 - cit:102621359 397.127