Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0901 | ATGGCTCTGGTCTTGCATGTGGGGAAGGGAAATAAAAATGCTTTCAAGACTCTTATTGCGGCAGAGTACAATGGCATCAAAGTTGAACTAGTCCCAGATTTTGAGATGGGCGTTTCCAACAAAACTCCAGAATTTCTCAAGATGAACCCGATTGGGAAGGTTCCTGTGTTGGAAACCCCTGATGGTGCCATCTTTGAGAGCAATGCCATAGCCCGTTATGTGACTCGCTTGAAGTCCGATACAACTCTATTTGGTTCTTCTCCTATTGACTATGGCCACGTTGAGCAGTGGATAGATTTTGCATCGCTGGAGCTTGATAGTAATATAGTGGCTTGGATCAGACCTAGAAGGGGATTTGCACCATACGTAGCTGCTGTCGAGGAAGCTGCAATTACTGCATTGAAGAGATCATTGGGTGCTTTGAACACACACCTTGCTTCAAACACATTCCTCGTTGGCCATTCAGTGACGCTGGCTGACATAATATTGACATGTAACTTGTATCTTGGCTTCAGTCATCTTTTCACCAAAAGCTTTACTTCTGAGTTCCCTCATGTTGAGAGATACTTCTGGACTCTGGTCAACCAACCAAAATTCAAAAAGATAATCGGTGAGGTGAAGCAGACAGATTCTATTCCACCAATTCCATCTGCGAAGAAACCTTCCCAGCCCAAGGAGGTTGCCAAGCCAAAACCCAACGAAGCCAAGAAAGAAGAGGTGAGGCCCAAGCCACAAGCTGCTGCTGTGGAAGAGGAAGAGGCCCCCAAGCCCAAAGCAAAGAACCCCCTTGATCTCCTTCCTCCAAGCCCGATGATTCTTGATGAGTGGAAGCGTCTCTACTCCAACACCAAGACCAACTTCCGTGAGGTCGCAATTAAGGGATTCTGGGATATGTTTGACCCAGAGGGATACTCACTTTGGTTCTGTGACTACAAATACAATGATGAAAACACAGTCTCCTATGTGACACTTAACAAGGTTGGTGGGTTTCTCCAGCGTATGGATCTTGCCCGCAAATATGCTTTCGGGAAAATGCTAGTGATTGGATCCGAGCCACCATTTAAGGTGAAGGGTCTATGGCTTTTCCGTGGGCAAGAGATTCCTCCATTTGTCATGGCGGAGTGCTATGATATGGAGCTCTTTGAGTGGACTAAGGTCGATCTTTCCAATGAGAGCCAAAAGGAGAGGGTCAATCAAATGATCGAAGATCAGGAGCCTTTTGAAGGGGAGGCCCTTTTGGATGCAAAATGCTTCAAGTGA | 1260 | 46.27 | MALVLHVGKGNKNAFKTLIAAEYNGIKVELVPDFEMGVSNKTPEFLKMNPIGKVPVLETPDGAIFESNAIARYVTRLKSDTTLFGSSPIDYGHVEQWIDFASLELDSNIVAWIRPRRGFAPYVAAVEEAAITALKRSLGALNTHLASNTFLVGHSVTLADIILTCNLYLGFSHLFTKSFTSEFPHVERYFWTLVNQPKFKKIIGEVKQTDSIPPIPSAKKPSQPKEVAKPKPNEAKKEEVRPKPQAAAVEEEEAPKPKAKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMFDPEGYSLWFCDYKYNDENTVSYVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMAECYDMELFEWTKVDLSNESQKERVNQMIEDQEPFEGEALLDAKCFK | 419 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4638505 | 4641401 | + | Conep03aG0093200.1 | Cone3ag0901 | 434360 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0901 | 419 | FunFam | Elongation factor 1 gamma | 80 | 215 | - | - | |
Cone3ag0901 | 419 | SFLD | Glutathione Transferase (cytosolic) | 5 | 190 | IPR040079 | - | |
Cone3ag0901 | 419 | Pfam | Elongation factor 1 gamma, conserved domain | 258 | 366 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone3ag0901 | 419 | SUPERFAMILY | GST C-terminal domain-like | 80 | 212 | IPR036282 | - | |
Cone3ag0901 | 419 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 87 | 215 | IPR010987 | - | |
Cone3ag0901 | 419 | Pfam | Glutathione S-transferase, C-terminal domain | 125 | 197 | IPR004046 | - | |
Cone3ag0901 | 419 | CDD | GST_N_EF1Bgamma | 3 | 77 | - | - | |
Cone3ag0901 | 419 | Gene3D | Glutaredoxin | 1 | 74 | - | - | |
Cone3ag0901 | 419 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 1 | 82 | IPR004045 | - | |
Cone3ag0901 | 419 | FunFam | Elongation factor 1B gamma | 1 | 74 | - | - | |
Cone3ag0901 | 419 | ProSiteProfiles | Elongation factor 1 (EF-1) gamma C-terminal domain profile. | 259 | 419 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone3ag0901 | 419 | Gene3D | - | 80 | 212 | - | - | |
Cone3ag0901 | 419 | SMART | EF1G_2 | 258 | 366 | IPR001662 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone3ag0901 | 419 | MobiDBLite | consensus disorder prediction | 210 | 261 | - | - | |
Cone3ag0901 | 419 | MobiDBLite | consensus disorder prediction | 224 | 259 | - | - | |
Cone3ag0901 | 419 | FunFam | Elongation factor 1-gamma 1 | 259 | 419 | - | - | |
Cone3ag0901 | 419 | CDD | GST_C_EF1Bgamma_like | 90 | 210 | - | - | |
Cone3ag0901 | 419 | Gene3D | Translation elongation factor EF1B, gamma chain, conserved domain | 259 | 419 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone3ag0901 | 419 | SUPERFAMILY | Thioredoxin-like | 2 | 84 | IPR036249 | - | |
Cone3ag0901 | 419 | SFLD | Main (cytGST) | 5 | 190 | - | - | |
Cone3ag0901 | 419 | Pfam | Glutathione S-transferase, N-terminal domain | 10 | 75 | IPR004045 | - | |
Cone3ag0901 | 419 | SUPERFAMILY | eEF1-gamma domain | 260 | 419 | IPR036433 | GO:0003746(InterPro)|GO:0006414(InterPro) | |
Cone3ag0901 | 419 | PANTHER | ELONGATION FACTOR 1-GAMMA 1-RELATED | 1 | 419 | IPR044628 | GO:0004364(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0874 | Cone-Chr10:4507903 | Cone3ag0901 | Cone-Chr3:4638505 | 3.17E-279 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0901 | K03233 | - | vvi:100264325 | 697.197 |