Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0901 ATGGCTCTGGTCTTGCATGTGGGGAAGGGAAATAAAAATGCTTTCAAGACTCTTATTGCGGCAGAGTACAATGGCATCAAAGTTGAACTAGTCCCAGATTTTGAGATGGGCGTTTCCAACAAAACTCCAGAATTTCTCAAGATGAACCCGATTGGGAAGGTTCCTGTGTTGGAAACCCCTGATGGTGCCATCTTTGAGAGCAATGCCATAGCCCGTTATGTGACTCGCTTGAAGTCCGATACAACTCTATTTGGTTCTTCTCCTATTGACTATGGCCACGTTGAGCAGTGGATAGATTTTGCATCGCTGGAGCTTGATAGTAATATAGTGGCTTGGATCAGACCTAGAAGGGGATTTGCACCATACGTAGCTGCTGTCGAGGAAGCTGCAATTACTGCATTGAAGAGATCATTGGGTGCTTTGAACACACACCTTGCTTCAAACACATTCCTCGTTGGCCATTCAGTGACGCTGGCTGACATAATATTGACATGTAACTTGTATCTTGGCTTCAGTCATCTTTTCACCAAAAGCTTTACTTCTGAGTTCCCTCATGTTGAGAGATACTTCTGGACTCTGGTCAACCAACCAAAATTCAAAAAGATAATCGGTGAGGTGAAGCAGACAGATTCTATTCCACCAATTCCATCTGCGAAGAAACCTTCCCAGCCCAAGGAGGTTGCCAAGCCAAAACCCAACGAAGCCAAGAAAGAAGAGGTGAGGCCCAAGCCACAAGCTGCTGCTGTGGAAGAGGAAGAGGCCCCCAAGCCCAAAGCAAAGAACCCCCTTGATCTCCTTCCTCCAAGCCCGATGATTCTTGATGAGTGGAAGCGTCTCTACTCCAACACCAAGACCAACTTCCGTGAGGTCGCAATTAAGGGATTCTGGGATATGTTTGACCCAGAGGGATACTCACTTTGGTTCTGTGACTACAAATACAATGATGAAAACACAGTCTCCTATGTGACACTTAACAAGGTTGGTGGGTTTCTCCAGCGTATGGATCTTGCCCGCAAATATGCTTTCGGGAAAATGCTAGTGATTGGATCCGAGCCACCATTTAAGGTGAAGGGTCTATGGCTTTTCCGTGGGCAAGAGATTCCTCCATTTGTCATGGCGGAGTGCTATGATATGGAGCTCTTTGAGTGGACTAAGGTCGATCTTTCCAATGAGAGCCAAAAGGAGAGGGTCAATCAAATGATCGAAGATCAGGAGCCTTTTGAAGGGGAGGCCCTTTTGGATGCAAAATGCTTCAAGTGA 1260 46.27 MALVLHVGKGNKNAFKTLIAAEYNGIKVELVPDFEMGVSNKTPEFLKMNPIGKVPVLETPDGAIFESNAIARYVTRLKSDTTLFGSSPIDYGHVEQWIDFASLELDSNIVAWIRPRRGFAPYVAAVEEAAITALKRSLGALNTHLASNTFLVGHSVTLADIILTCNLYLGFSHLFTKSFTSEFPHVERYFWTLVNQPKFKKIIGEVKQTDSIPPIPSAKKPSQPKEVAKPKPNEAKKEEVRPKPQAAAVEEEEAPKPKAKNPLDLLPPSPMILDEWKRLYSNTKTNFREVAIKGFWDMFDPEGYSLWFCDYKYNDENTVSYVTLNKVGGFLQRMDLARKYAFGKMLVIGSEPPFKVKGLWLFRGQEIPPFVMAECYDMELFEWTKVDLSNESQKERVNQMIEDQEPFEGEALLDAKCFK 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4638505 4641401 + Conep03aG0093200.1 Cone3ag0901 434360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0901 419 FunFam Elongation factor 1 gamma 80 215 - -
Cone3ag0901 419 SFLD Glutathione Transferase (cytosolic) 5 190 IPR040079 -
Cone3ag0901 419 Pfam Elongation factor 1 gamma, conserved domain 258 366 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone3ag0901 419 SUPERFAMILY GST C-terminal domain-like 80 212 IPR036282 -
Cone3ag0901 419 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Cone3ag0901 419 Pfam Glutathione S-transferase, C-terminal domain 125 197 IPR004046 -
Cone3ag0901 419 CDD GST_N_EF1Bgamma 3 77 - -
Cone3ag0901 419 Gene3D Glutaredoxin 1 74 - -
Cone3ag0901 419 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Cone3ag0901 419 FunFam Elongation factor 1B gamma 1 74 - -
Cone3ag0901 419 ProSiteProfiles Elongation factor 1 (EF-1) gamma C-terminal domain profile. 259 419 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone3ag0901 419 Gene3D - 80 212 - -
Cone3ag0901 419 SMART EF1G_2 258 366 IPR001662 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone3ag0901 419 MobiDBLite consensus disorder prediction 210 261 - -
Cone3ag0901 419 MobiDBLite consensus disorder prediction 224 259 - -
Cone3ag0901 419 FunFam Elongation factor 1-gamma 1 259 419 - -
Cone3ag0901 419 CDD GST_C_EF1Bgamma_like 90 210 - -
Cone3ag0901 419 Gene3D Translation elongation factor EF1B, gamma chain, conserved domain 259 419 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone3ag0901 419 SUPERFAMILY Thioredoxin-like 2 84 IPR036249 -
Cone3ag0901 419 SFLD Main (cytGST) 5 190 - -
Cone3ag0901 419 Pfam Glutathione S-transferase, N-terminal domain 10 75 IPR004045 -
Cone3ag0901 419 SUPERFAMILY eEF1-gamma domain 260 419 IPR036433 GO:0003746(InterPro)|GO:0006414(InterPro)
Cone3ag0901 419 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 419 IPR044628 GO:0004364(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0874 Cone-Chr10:4507903 Cone3ag0901 Cone-Chr3:4638505 3.17E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0901 K03233 - vvi:100264325 697.197