Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag0920 | ATGGGAAAGGGACTCTCCTTTCGCCGGAGCATCAGTCGGCGGTCAAAGAAGACGACGGAGCAACCAGCCTTGATTGGCGAAGGTTCTCCGTTGAATGCTAATAATAATGATAGATTGATCGGTGTTGGGGGTGGAACGGTGGCGAAGGTGAAGAAGAAGGCTGGAGGAGCGAGATTATGGATGCGATTCGACCGTTCGGGGAACTCGGAGGTTGGGGAGTGCGACAAGAGCGATATTATCCGGAAAGCAGCAATTCCAGCTCGGGATTTGAGGATACTTGGTCCTGTTTTCTCTCATTCGTCCAATATCCTAGCAAGAGAGAAGGCCATGGTTGTTAATTTGGAGTTTATAAAGGCTATAGTTACTGCTGAAGAAGTGCTTATACTCGACCCACTCCGGCAGGAGGTTCTTCCATTTGTCAATCAGCTAAGGCAACAAATTCCTCAGAAAAATTCATCTGGAAACAATGGAGCAGGGACTCTAGACGACCAAGAAAATAGCATGCATGATCTACCATTTGAATTTCAGGTCCTGGAGATTGCTTTAGAGGTTGTTTGTATGTGCTTAGACTCCCATGTGGCTGACCTTGAGAAGAATGCTTACCCTGTGCTGGATGAACTGGCTCGGAATGTTAGCACCAAAAATCTTGAACATGTTAGGAGTTTGAAGAGCATGCTTACCCGCCTGCTTGCTCGTGTGCAAAAGGTGAGAGATGAACTCGAACATCTATTGGATGATAATGAAGATATGGCACACTTATATTTGACGAGGAAGTTGATGCTAACTCAGCAACATGACGCCTTGTCCAACACCATCCCCACTACCACCCTTCATCGACTTGGTTCTAATAGGAGCGGTAGTATGGTTACTAGCAACCTTATGGCGGATAATGATGTGGAGGATTTGGAAATGTTGCTCGAGGCTTATTTTATGCAATTGGATGGGACCCGTAACAAGATATTATCTGTTCGAGAATACATCGATGATACAGAGGATTATGTCAACATCCAACTTGACAACCAGAGAAACGAACTTATTCAACTTCAATTGACATTAACCATTGCTTCATTTGCTATATCGCTGGAAACCCTGATTGCAGGGGCATTTGGAATGAACATCCCTTGTCAATTGTACAAGATGAATGGGATCTTCGAGATATTTGTCGGAAGTACTTCTGCAGGTTGTGTGTTAATCTTCCTGCTTGTTTTAGGATATGCAAGATGGAAGAAGTTGCTTGGTTCTTAA | 1245 | 44.42 | MGKGLSFRRSISRRSKKTTEQPALIGEGSPLNANNNDRLIGVGGGTVAKVKKKAGGARLWMRFDRSGNSEVGECDKSDIIRKAAIPARDLRILGPVFSHSSNILAREKAMVVNLEFIKAIVTAEEVLILDPLRQEVLPFVNQLRQQIPQKNSSGNNGAGTLDDQENSMHDLPFEFQVLEIALEVVCMCLDSHVADLEKNAYPVLDELARNVSTKNLEHVRSLKSMLTRLLARVQKVRDELEHLLDDNEDMAHLYLTRKLMLTQQHDALSNTIPTTTLHRLGSNRSGSMVTSNLMADNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLTLTIASFAISLETLIAGAFGMNIPCQLYKMNGIFEIFVGSTSAGCVLIFLLVLGYARWKKLLGS | 414 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4724747 | 4727143 | - | Conep03aG0095100.1 | Cone3ag0920 | 434379 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag0920 | 414 | Coils | Coil | 219 | 250 | - | - | |
| Cone3ag0920 | 414 | Gene3D | - | 46 | 131 | - | - | |
| Cone3ag0920 | 414 | Pfam | Magnesium transporter MRS2-like | 63 | 266 | - | - | |
| Cone3ag0920 | 414 | Pfam | Magnesium transporter MRS2-like | 291 | 342 | - | - | |
| Cone3ag0920 | 414 | Gene3D | Magnesium transport protein CorA, transmembrane region | 132 | 345 | - | - | |
| Cone3ag0920 | 414 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 46 | 411 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Cone3ag0920 | 414 | CDD | Mrs2_Mfm1p-like | 60 | 411 | IPR039204 | - | |
| Cone3ag0920 | 414 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Cone3ag0920 | 414 | FunFam | Magnesium transporter MRS2-5 | 145 | 345 | - | - | |
| Cone3ag0920 | 414 | FunFam | Magnesium transporter MRS2-1 | 48 | 131 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag0920 | Cone-Chr3:4724747 | Cone7ag1020 | Cone-Chr7:7874808 | 5.74E-93 | dispersed | |
| Cone10ag0893 | Cone-Chr10:4625335 | Cone3ag0920 | Cone-Chr3:4724747 | 2.87E-270 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag0920 | K16075 | - | cit:102630717 | 563.918 |