Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0923 ATGTGGTTGAAGAAGACAAAGAGGAAGGCTCTTTTTGCTTCTTTGGAGAAGATCAAGGAAGAATTGATGCTACTTGGGCTCATATCTTTGTTGTTGTCACAATCCGCAAGCTGGATCTCTCAAATCTGTGTGAATTCATCTCTTTTCAGCAGCCGTTTCTACAGTTGTTCAGAAAATGATTATCACATTGACGGACATGTTATGCTTTTCGAAACTTCATTTTCATCTCCCAATGAGACTGCCATTCCGCCAAGAGGAATAAATATTATTCATCATTGTGGTGAGGGCCATGAACCTTTTGTTTCATACGAGGGTCTTGAGCAACTCCACCGATTCTTGTTTGTTCTTGGGATCACTCATGTTTTATATAGTTGCTTGGCTGTTGGTCTAGCTATGAGCAAGATTTACAGTTGGAGAAAATGGGAAAACCAGACCATAGCTCTTGATGAGAGTTTGCAAGCAAAGAAAAGCAAGGTAATGAGGAGGCAAACCACCTTCATTTTCCATCATACTTCACATCCGTGGAGCAGAAGCCGTATACTCATTTGGATGCTCTGCTTTTTACGACAATTTAAAAGTTCCATTAAGAAATCAGACTACTTAGCACTGCGCTTGGGTTTCATTACCAAGCACAAGCTACCACTTTCATATAATTTCCACAACTATATGGTTCGGAGCATGGAAGATGAGTTTCAGGGAATCGTCGGTATTAGCTATCCACTTTGGGCCTATGCAATAGTCTGCATCTTCATAAATATTCATGGTTTGAACATTTACTTCTGGCTTTCTTTTATCCCTGCCATTCTTGTGATGGTGGTTGGAACAAAACTGCAGCATGTGGTCTCATCTCTAGCACTTGAAATATTGGAACAATCCGGACCGTCTGTTGGGAATCAGGTTAAACCACGCGATGATCTGTTTTGGTTCGGAAAACCTGAGATTTTATTAAGATTGATACAATTCATCATATTTCAGAATGCCTTTGAAATGGCAACTTTTATCTGGTCCCTGTGGGGATTTGAACAGAGATCTTGCTTTATGAAGAATGATTGGATGATAATCATTCGATTAGCTTCTGGAATTGCTGTGCAGTTCTGGTGTAGCTATGGCACGGTGCCTCTTAATGTCATTGTTACACTGATGGGATCTCGGTGTAAGAAAGCCTTAGTTTCGGAAAGTGTCCGGGAATCACTCCATAGCTGGTGCAAGAGAGTAAAGGATAGATCTTCGAAACGAGAATCTGCGCTTTCAGTTACTACAAGGTCGGTATGTTCATTAGAATCGACAATCGATGAAAGGGATGAAGTAACAGTTGCCTCTGGTACTTTATCTCGAGCCTCCTCTTTAGACTCACTTAATCAATTAACTGTTGAATCATGCAATCGGCCCGAGGCCTTAACCCTTGAGGCATCTAACTTGACTCAACATGAAAACGAGCTCTCATTTAGAACGGAAGAGCATTTATGTGAAAATGGAGATGGAAGAGGAGGAGAAGGAGACAAAGCTGAGACCCTCTTGGAGTTGTTTAAGAGGACTTGA 1539 41.2 MWLKKTKRKALFASLEKIKEELMLLGLISLLLSQSASWISQICVNSSLFSSRFYSCSENDYHIDGHVMLFETSFSSPNETAIPPRGINIIHHCGEGHEPFVSYEGLEQLHRFLFVLGITHVLYSCLAVGLAMSKIYSWRKWENQTIALDESLQAKKSKVMRRQTTFIFHHTSHPWSRSRILIWMLCFLRQFKSSIKKSDYLALRLGFITKHKLPLSYNFHNYMVRSMEDEFQGIVGISYPLWAYAIVCIFINIHGLNIYFWLSFIPAILVMVVGTKLQHVVSSLALEILEQSGPSVGNQVKPRDDLFWFGKPEILLRLIQFIIFQNAFEMATFIWSLWGFEQRSCFMKNDWMIIIRLASGIAVQFWCSYGTVPLNVIVTLMGSRCKKALVSESVRESLHSWCKRVKDRSSKRESALSVTTRSVCSLESTIDERDEVTVASGTLSRASSLDSLNQLTVESCNRPEALTLEASNLTQHENELSFRTEEHLCENGDGRGGEGDKAETLLELFKRT 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 4735682 4740497 + Conep03aG0095400.1 Cone3ag0923 434382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0923 512 Pfam Mlo family 2 423 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone3ag0923 512 PANTHER MLO-LIKE PROTEIN 1 2 433 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0923 Cone-Chr3:4735682 Cone6ag0137 Cone-Chr6:668377 9.51E-135 dispersed
Cone12ag0818 Cone-Chr12:7449757 Cone3ag0923 Cone-Chr3:4735682 3.00E-158 transposed
Cone10ag0896 Cone-Chr10:4635317 Cone3ag0923 Cone-Chr3:4735682 4.65E-163 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0923 K08472 - csv:101204236 749.199