Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag0931 | ATGACGATGTGGTCGGGTACCCGGAAAAGCCACTGTGACGGCAAGGTGGGCGGAGGAAAGTCATCAGAAGGCAGTCATGATGTGGTAGTAGATGGAGATGAGAATATTGAAATGTTATCATCACCTAATTCTTTGAACTTGAGGAATCTTTCAAAGCTTATTCTTCCTCCATTGGGTGCTTCAAGCAACTTCAACCTTAATCATCTAAACTCCAAAAAATGGGTCATTTTACCCATGGATTCAAGATACAGGTGTTGGGAGAGTTTGATGATGGTTTTGGTACTTTATTCGGCATGGGCTTACCCGTTTGAGGTGGCTTTTCTGAATACATCTCCAAAAAGTAGAGTTTACGACATTACAGACAACATAGTCGACCTTTTCTTCGGCATCGACATTGTCTTGACTTTCTTCCTTGCCTACATTGATCCTAGGACTCATCTACTTGTCTTTCACCGTAAAAAAATCGCTATCAGGTACTTATCAACATGGTTTGTGATGGATTTGGCATCAACAGTCCCATTTGAGGCAATAGCTTACCTGATCACACGCAAACATAAGTTGAATCTGGCTTGTACTCTCTTGGGTTTGCTCAGATTTTGGAGGCTAAGGCGTGTCAAGCAATTTTTCACCAGGCTTGAGAAGGACATTAGATTCAGCTACTTTTGGGTTCGGTGCGCCAGGCTTTTATCTGTAACATTGTTTTTGGTGCACTGTGCGGGATGTCTTTACTACATGTTAGCTGATAGGTATCCAGAAAAGGGAAACACTTGGCTTGGATCAATGAATCCAAATTTCCGAGAGACAAGCTTGAAGATCAGATATATCGCAGCCTTATATTGGTCAGTCACGACAATGACAACCGTTGGATATGGTGATCTTCATGCCGTTAACACCGTAGAAATGGTCTTCATCATATTCTACATGCTCTTTAACCTTGGCCTTACCGCTTACTTAATAGGAAACATGACCAACTTGGTCGTTGAAGGCACCCGCCGCACTATGGAGTTTAGAAATAGCATTGAGGCAGCATCAAATTTTGTGAATAGAAACAGGTTGCCTCCAAAGTTGAAGGAACATATATTGGCATACATGTGCTTGAGGTTTAAAGCTGAGAGTTTGAATCAATACCATCTAATCGATCAGCTACCCAAATCCATCTGTAAGAGCATATGCCAACATTTGTTTTTGCCTACAGTTGAGAAGGTCTACCTCTTCAAGGGTGTCTCAAGGGAGATACTCTTACGCTTGGTCGCAAAGATGAAGGCGGAGTACATACCACCAAAAGAGGATGTAATAATGCAAAATGAAGCCCCAGAAGATGTATACATAATAGTGTCAGGAGAAGTAGAGATTATAGAGTGTGAAATAGAGAAGGAGACAATTGTGGGGAGTTTACAAAGTGGGGACATGTTCGGAGAGATCAGCGCACTTTGTTCCGGGCACCATAACTTTACTTATAGAACTAAGACCCTTTCACAGCTCTTGAGGCTCAAAACAAGCGATCTACTATATGCTCTACAAATCAATCAACAAGATCAGGTTTCTATAGTTGCAAACTTCCTTAAGAGAAGAGAACTGGGGCACAAAATAACTGTAGATGATACAATTACTAAAGATGAGGAGCAGAATTGGGGATTTAGAGAATCCATGGGACCAAATTATAATATTGAAATTCCGAGGGTGAGTATTCACAGAGGTCATCCCATACTCAGGAAACAGGCTTGTTTGGCTCAAGTTGCTGGAAAGCTGATTAGGCTGCCAAATTCTATACAAGAGCTCAAAAGTATAGCAGGCCAAATGATGGGCATTGATGTAAGAAATGCGATGGTGATGGATGAAGGAGGTGCAGAAATAGACTCCATTGAAGTGATTAGGGATAATGATAAGCTTTTCATAGCTGAAAATTCCAACTAA | 1914 | 41.38 | MTMWSGTRKSHCDGKVGGGKSSEGSHDVVVDGDENIEMLSSPNSLNLRNLSKLILPPLGASSNFNLNHLNSKKWVILPMDSRYRCWESLMMVLVLYSAWAYPFEVAFLNTSPKSRVYDITDNIVDLFFGIDIVLTFFLAYIDPRTHLLVFHRKKIAIRYLSTWFVMDLASTVPFEAIAYLITRKHKLNLACTLLGLLRFWRLRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFLVHCAGCLYYMLADRYPEKGNTWLGSMNPNFRETSLKIRYIAALYWSVTTMTTVGYGDLHAVNTVEMVFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVNRNRLPPKLKEHILAYMCLRFKAESLNQYHLIDQLPKSICKSICQHLFLPTVEKVYLFKGVSREILLRLVAKMKAEYIPPKEDVIMQNEAPEDVYIIVSGEVEIIECEIEKETIVGSLQSGDMFGEISALCSGHHNFTYRTKTLSQLLRLKTSDLLYALQINQQDQVSIVANFLKRRELGHKITVDDTITKDEEQNWGFRESMGPNYNIEIPRVSIHRGHPILRKQACLAQVAGKLIRLPNSIQELKSIAGQMMGIDVRNAMVMDEGGAEIDSIEVIRDNDKLFIAENSN | 637 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4806261 | 4809923 | - | Conep03aG0096200.1 | Cone3ag0931 | 434390 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag0931 | 637 | SUPERFAMILY | Voltage-gated potassium channels | 78 | 327 | - | - | |
| Cone3ag0931 | 637 | FunFam | Potassium channel KAT3 | 85 | 328 | - | - | |
| Cone3ag0931 | 637 | ProSiteProfiles | KHA domain profile. | 560 | 637 | IPR021789 | - | |
| Cone3ag0931 | 637 | Pfam | Cyclic nucleotide-binding domain | 424 | 507 | IPR000595 | - | |
| Cone3ag0931 | 637 | ProSiteProfiles | cAMP/cGMP binding motif profile. | 404 | 523 | IPR000595 | - | |
| Cone3ag0931 | 637 | SUPERFAMILY | cAMP-binding domain-like | 331 | 523 | IPR018490 | - | |
| Cone3ag0931 | 637 | Pfam | Ion transport protein | 83 | 333 | IPR005821 | GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
| Cone3ag0931 | 637 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Cone3ag0931 | 637 | Gene3D | Jelly Rolls | 371 | 544 | IPR014710 | - | |
| Cone3ag0931 | 637 | PRINTS | EAG/ELK/ERG potassium channel family signature | 274 | 291 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone3ag0931 | 637 | PRINTS | EAG/ELK/ERG potassium channel family signature | 318 | 327 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone3ag0931 | 637 | PRINTS | EAG/ELK/ERG potassium channel family signature | 300 | 311 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone3ag0931 | 637 | PRINTS | EAG/ELK/ERG potassium channel family signature | 121 | 131 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone3ag0931 | 637 | PRINTS | EAG/ELK/ERG potassium channel family signature | 132 | 141 | IPR003938 | GO:0005249(InterPro)|GO:0006813(InterPro)|GO:0016020(InterPro) | |
| Cone3ag0931 | 637 | CDD | CAP_ED | 404 | 514 | IPR000595 | - | |
| Cone3ag0931 | 637 | SMART | cnmp_10 | 404 | 521 | IPR000595 | - | |
| Cone3ag0931 | 637 | Gene3D | - | 84 | 327 | - | - | |
| Cone3ag0931 | 637 | PANTHER | POTASSIUM CHANNEL AKT1 | 40 | 530 | IPR045319 | GO:0005249(InterPro)|GO:0006813(InterPro) | |
| Cone3ag0931 | 637 | Pfam | KHA, dimerisation domain of potassium ion channel | 560 | 632 | IPR021789 | - | |
| Cone3ag0931 | 637 | FunFam | Potassium channel KAT2 | 392 | 526 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag0931 | Cone-Chr3:4806261 | Cone6ag0891 | Cone-Chr6:4562253 | 7.26E-169 | dispersed | |
| Cone10ag0903 | Cone-Chr10:4677144 | Cone3ag0931 | Cone-Chr3:4806261 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag0931 | K21867 | - | csv:101205212 | 791.956 |