Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag0945 | ATGATAGGAATTGATCTCACACTAAAAGTGGATGAGAAAGAAGTAGAATCAGAATCAGAATCAGTTGCAGCAGCTGCAGGTAAAGATCATGATCATGATCATACAGAAGATGCAGCCGAAATTACTGCTGTGGGAGAAGTACTAGAGGATAATTCCTCTTTAATGGCGGAAACATCCCACCCTCACCATAATAACAACACAGAGTTCGAGCTGTCTGTGTTGCAGAAGGAAATGGATCGAATGAAAGAAGAAAACAACTTGTTGAGGAACGTAGTGGAGCAAACAATGAAAGATTTCTACGATCTTCAGACGAAATTTACAATCACCCAACAACATAATCAAATAAAGAATCTTTCACTCCATGGTTATAACCATCATGAGGAGGAGCAAAAGGAGATTCCTAAAGTTGATCTTCATCATGAAGATCGAGGTATTATAAGGGAGAATGAATTAGGGTTATCATTAGGGTTACATACAAGTAGCTCATCATATGATCATCATCAAATTAGAGATCAAGATCACAAAGAAAAGAATAAGGAAGCACATGATATGATCACAAGTACTACTACTGCTACTACTACTGGTAATAGTAACTTGGGGCAAAACAAGCTGCACTACCAACCTTCGGATTTTCCCGGAATAGCGAACCATGTTTCCGCCCCGCCAAACAGAAAAGATAGGGTTTCTGTTAGAGCCAGATGTGAAACAGCCACAATGAATGATGGGTGTCAATGGAGAAAATATGGGCAAAAAATTGCAAAAGGAAATCCTTGCCCACGAGCCTATTATCGTTGCACGGTTGCTCCCGGCTGCCCAGTCCGAAAACAGGTGCAGAGATGTTTGGAAGACATGTCCATTCTAATAACAACATATGAAGGAACACATAACCATCCACTCCCTGTTGGAGCAGCAGCCATGGCTTCCACTACCTCAGCAGCGGCAGTGGCTGCGGCTGCTAATTCCCTTTCAAATACTAGTTACCATAACTTTCCCTTGATAAACCCATCTACTTTTCTTCATCCCTCAATTACAAATCATCTTAAAATCACAAACCCTAATGACCCATTACTAGAATTCTCCCTCAATAATAATGTTAATGCTAGAGCTTCAAAAAGTATTTCTCCATTGACCCATAATTGGATGCACAACATTAATGGTCAATTTTTGAGCTCTAAATCATCTTTAACAGCGGATCATCATGATAAGAAGCTGCCATGGGAGTTACCAGAAGATCAAAATAATAATAGCAATAACATGTTACTTAATGCAGAGAATGTGACTAAGATTGCTTCTGACCCTAAATTTAGGGTTGCTGTTGCAGCTGCTATTTCATCTATCATTAGTACTAATGATCAGGCCCACATGACACCTAGTTCCAGTACTACATCTCGGGCAGGATCAACATCTTTCGGGCAGCGCTGGGATGGGGAAATGGGCAGCTCCGGTGGTGGGGCTGGGAAGAACAACTGGATCCTTGAATCGTTTTCGGCAAATGGTTGA | 1500 | 41.07 | MIGIDLTLKVDEKEVESESESVAAAAGKDHDHDHTEDAAEITAVGEVLEDNSSLMAETSHPHHNNNTEFELSVLQKEMDRMKEENNLLRNVVEQTMKDFYDLQTKFTITQQHNQIKNLSLHGYNHHEEEQKEIPKVDLHHEDRGIIRENELGLSLGLHTSSSSYDHHQIRDQDHKEKNKEAHDMITSTTTATTTGNSNLGQNKLHYQPSDFPGIANHVSAPPNRKDRVSVRARCETATMNDGCQWRKYGQKIAKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGAAAMASTTSAAAVAAAANSLSNTSYHNFPLINPSTFLHPSITNHLKITNPNDPLLEFSLNNNVNARASKSISPLTHNWMHNINGQFLSSKSSLTADHHDKKLPWELPEDQNNNSNNMLLNAENVTKIASDPKFRVAVAAAISSIISTNDQAHMTPSSSTTSRAGSTSFGQRWDGEMGSSGGGAGKNNWILESFSANG | 499 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 4905876 | 4908001 | + | Conep03aG0097600.1 | Cone3ag0945 | 434404 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag0945 | 499 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 41 | 452 | IPR044810 | GO:0003700(InterPro) | |
Cone3ag0945 | 499 | Gene3D | WRKY domain | 224 | 301 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag0945 | 499 | Coils | Coil | 64 | 98 | - | - | |
Cone3ag0945 | 499 | MobiDBLite | consensus disorder prediction | 157 | 181 | - | - | |
Cone3ag0945 | 499 | SMART | WRKY_cls | 239 | 299 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag0945 | 499 | MobiDBLite | consensus disorder prediction | 164 | 181 | - | - | |
Cone3ag0945 | 499 | MobiDBLite | consensus disorder prediction | 451 | 475 | - | - | |
Cone3ag0945 | 499 | Pfam | WRKY DNA -binding domain | 240 | 298 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag0945 | 499 | ProSiteProfiles | WRKY domain profile. | 234 | 300 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag0945 | 499 | FunFam | probable WRKY transcription factor 31 | 224 | 301 | - | - | |
Cone3ag0945 | 499 | MobiDBLite | consensus disorder prediction | 451 | 489 | - | - | |
Cone3ag0945 | 499 | SUPERFAMILY | WRKY DNA-binding domain | 232 | 300 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0326 | Cone-Chr20:1457470 | Cone3ag0945 | Cone-Chr3:4905876 | 9.62E-22 | dispersed | |
Cone20ag1141 | Cone-Chr20:7768393 | Cone3ag0945 | Cone-Chr3:4905876 | 3.98E-23 | dispersed | |
Cone3ag0945 | Cone-Chr3:4905876 | Cone8ag1424 | Cone-Chr8:11102295 | 4.27E-41 | dispersed | |
Cone3ag0945 | Cone-Chr3:4905876 | Cone3ag1328 | Cone-Chr3:32232091 | 4.02E-42 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45831 | PF00069 | Pkinase | 1.40E-59 | CL0016 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag0945 | - | - | - | 0.0 |