Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag0950 | ATGGCTGCTACATCTGGTGCTGTGCTAACTGGGTTAACCTCTCCCTTCTTGTGTGGCAGCAAGAGTTCGAGCCAGGCCTTATTCTCTGCCGCCAGAGTTGAAGGTGCAGCCACATCTCGTAAGTTGAATCTGGTTGTAGCGGCCGCTGCTGCACCCAAGAAATCCTGGATCCCTGCCGTCAAGGGTGGTGGCAGCTTTGTCAACCCAGAATGGCTCGATGGCTCGCTTCCAGGTGACTTTGGATTTGATCCATTGGGATTGGGCAAGGACCCAGCATTCCTCAAGTGGTACAGAGAAGCTGAACTCATCCACGGGCGGTGGGCCATGGCAGCTGTAGTCGGCATATTTGTGGGTCAGGCTTGGAGTGGAATCCCGTGGTTTGAAGCCGGAGCCGACCCAGGTGCCATCGCACCCTTCTCCTTCGGCTCGTTGCTAGGAACCCAATTGCTTCTCATGGGTTGGGTCGAGAGCAAGAGATGGGTCGACTTTTTCAATCCAGACTCCCAATCGGTTGAGTGGGCCACACCATGGTCCAAGACTTCCGAGAACTTTGCTAATGCGACCGGAGAACAGGGTTACCCTGGCGGCAAGTTTTTTGACCCGTTAGGCTTAGCTGGTACCATTGAAAACGGAGTTTACATTGCGGATACAGAGAAGCTTGAGAGATTGAAGCTAGCTGAGATCAAGCACGCAAGGTTGGCCATGGTGGCTATGCTAATTTTCTACTTTGAGGCTGGTCAGGGGAAAACACCCCTTGGTGCCCTTGGCTTGTAG | 774 | 53.62 | MAATSGAVLTGLTSPFLCGSKSSSQALFSAARVEGAATSRKLNLVVAAAAAPKKSWIPAVKGGGSFVNPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTSENFANATGEQGYPGGKFFDPLGLAGTIENGVYIADTEKLERLKLAEIKHARLAMVAMLIFYFEAGQGKTPLGALGL | 257 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 4942721 | 4943977 | + | Conep03aG0098100.1 | Cone3ag0950 | 434409 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag0950 | 257 | Pfam | Chlorophyll A-B binding protein | 69 | 245 | IPR022796 | - | |
| Cone3ag0950 | 257 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 29 | 255 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
| Cone3ag0950 | 257 | Gene3D | Chlorophyll a/b binding protein domain | 69 | 256 | - | - | |
| Cone3ag0950 | 257 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 69 | 256 | - | - | |
| Cone3ag0950 | 257 | SUPERFAMILY | Chlorophyll a-b binding protein | 62 | 257 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag0950 | Cone-Chr3:4942721 | Cone4ag0830 | Cone-Chr4:5333628 | 1.97E-39 | dispersed | |
| Cone10ag0924 | Cone-Chr10:4844394 | Cone3ag0950 | Cone-Chr3:4942721 | 1.83E-178 | wgd | |
| Cone13ag0367 | Cone-Chr13:3363953 | Cone3ag0950 | Cone-Chr3:4942721 | 2.56E-38 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag0950 | K08917 | - | csv:101204705 | 449.514 |