Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0950 ATGGCTGCTACATCTGGTGCTGTGCTAACTGGGTTAACCTCTCCCTTCTTGTGTGGCAGCAAGAGTTCGAGCCAGGCCTTATTCTCTGCCGCCAGAGTTGAAGGTGCAGCCACATCTCGTAAGTTGAATCTGGTTGTAGCGGCCGCTGCTGCACCCAAGAAATCCTGGATCCCTGCCGTCAAGGGTGGTGGCAGCTTTGTCAACCCAGAATGGCTCGATGGCTCGCTTCCAGGTGACTTTGGATTTGATCCATTGGGATTGGGCAAGGACCCAGCATTCCTCAAGTGGTACAGAGAAGCTGAACTCATCCACGGGCGGTGGGCCATGGCAGCTGTAGTCGGCATATTTGTGGGTCAGGCTTGGAGTGGAATCCCGTGGTTTGAAGCCGGAGCCGACCCAGGTGCCATCGCACCCTTCTCCTTCGGCTCGTTGCTAGGAACCCAATTGCTTCTCATGGGTTGGGTCGAGAGCAAGAGATGGGTCGACTTTTTCAATCCAGACTCCCAATCGGTTGAGTGGGCCACACCATGGTCCAAGACTTCCGAGAACTTTGCTAATGCGACCGGAGAACAGGGTTACCCTGGCGGCAAGTTTTTTGACCCGTTAGGCTTAGCTGGTACCATTGAAAACGGAGTTTACATTGCGGATACAGAGAAGCTTGAGAGATTGAAGCTAGCTGAGATCAAGCACGCAAGGTTGGCCATGGTGGCTATGCTAATTTTCTACTTTGAGGCTGGTCAGGGGAAAACACCCCTTGGTGCCCTTGGCTTGTAG 774 53.62 MAATSGAVLTGLTSPFLCGSKSSSQALFSAARVEGAATSRKLNLVVAAAAAPKKSWIPAVKGGGSFVNPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWSKTSENFANATGEQGYPGGKFFDPLGLAGTIENGVYIADTEKLERLKLAEIKHARLAMVAMLIFYFEAGQGKTPLGALGL 257
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 4942721 4943977 + Conep03aG0098100.1 Cone3ag0950 434409
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0950 257 Pfam Chlorophyll A-B binding protein 69 245 IPR022796 -
Cone3ag0950 257 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 29 255 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
Cone3ag0950 257 Gene3D Chlorophyll a/b binding protein domain 69 256 - -
Cone3ag0950 257 FunFam Chlorophyll a-b binding protein, chloroplastic 69 256 - -
Cone3ag0950 257 SUPERFAMILY Chlorophyll a-b binding protein 62 257 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0950 Cone-Chr3:4942721 Cone4ag0830 Cone-Chr4:5333628 1.97E-39 dispersed
Cone10ag0924 Cone-Chr10:4844394 Cone3ag0950 Cone-Chr3:4942721 1.83E-178 wgd
Cone13ag0367 Cone-Chr13:3363953 Cone3ag0950 Cone-Chr3:4942721 2.56E-38 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0950 K08917 - csv:101204705 449.514