Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag0960 ATGGGTGTCTCCGAGCTCTCTCCTACTTCCGGTTCCGCCCTGAAATGGCTTGGTTTCGTCGTCGCCGTCTGGGTACAAGCCATCTCCGGCAACAACTACACCTTCGCCAACTACTCCGACGCGCTCAAATCCCTTATGAACCTTACCCAGACTGAGCTTAACAATCTCTCCGTCGCTAAAGATGTCGGTAAGGCCTTTGGTCTTCTCGCCGGTCTCGCCTCTGACCGCTTCCCCACTTGGCTAATTCTCCTCATCGGCGCCGTTGAAGGCCTCATCGGATACGGCGTCCAATGGCTCGTCGTCAGTGAGACCATCAGCCCCCTCTCTTATTGGCAGATGTGTATCTTCCTCTGCATGGGAGGGAACAGCACCACCTGGATGAACACGGCGGTGCTGGTGACATGCATCAGAAACTTCCGGACAAACAGAGGACCTGTCGCCGGAATTCTCAAGGGTTACGTTGGCCTAAGCACCGCCATTTTCACCGACCTATGCGCGGCCTTATTCAACGACGACTCTTCGTCCTTCCTCGCCATGTTATCCATTGTTCCCCTTGCCGTCTGCATCATCGCCTCCTTCTTCCTCCGTGAGCTCCCACCCTCATCCACTGCCGCCGAAGAGAGTGAGGAAACCAACTACTTCTGGATCTTCAACGGCGTGGCCGTCGTCATTGCCTTCTATCTCTTGGCCTACGATTTCATCCCCAACCCAAGCACTCTTTTCTCTTACATTTTTTCAGCTATACTCATTGTTCTGTTAGCCTCCCCTTTGCTTGTTCCCATATACTCGTTTTTCAAAACGTGGCGACGTCGGAATCTGGTCGGATCTAACCCTAGCCAGGACGTAGAAGGTCGGGTTGAAGAGCCGTTGCTTAGAGAGCAGGCACAGGCCGCAGTGTCTGAGGAGAATGCGGTGGTGGTGGTGGCGGCTGTGACGGTGGAGGCGGATGTTAAGAAGAAGCCGGTGATAGGTGAAGAGCACACAATCTTTGAGGCATTAAGGACCGTTGATTTCTGGATCTTGTTCGTGTCGTTTCTGTGTGGAGTGGGGACCGGATTGGCCGTTATCAACAATATGGCGCAAATTGGGTTGGCTTTAGGATACGCCGACGTTTCGATCTTCGTTTCTCTCACTAGTATTTGGGGCTTTTTCGGCCGGATTATTTCGGGTTCGGTTTCAGAGCACTTCATCAAGAAGCAAATGTAA 1206 52.82 MGVSELSPTSGSALKWLGFVVAVWVQAISGNNYTFANYSDALKSLMNLTQTELNNLSVAKDVGKAFGLLAGLASDRFPTWLILLIGAVEGLIGYGVQWLVVSETISPLSYWQMCIFLCMGGNSTTWMNTAVLVTCIRNFRTNRGPVAGILKGYVGLSTAIFTDLCAALFNDDSSSFLAMLSIVPLAVCIIASFFLRELPPSSTAAEESEETNYFWIFNGVAVVIAFYLLAYDFIPNPSTLFSYIFSAILIVLLASPLLVPIYSFFKTWRRRNLVGSNPSQDVEGRVEEPLLREQAQAAVSEENAVVVVAAVTVEADVKKKPVIGEEHTIFEALRTVDFWILFVSFLCGVGTGLAVINNMAQIGLALGYADVSIFVSLTSIWGFFGRIISGSVSEHFIKKQM 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 5472731 5481434 + Conep03aG0099100.1 Cone3ag0960 434419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag0960 401 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 398 - GO:0016020(PANTHER)
Cone3ag0960 401 Pfam Nodulin-like 15 261 IPR010658 -
Cone3ag0960 401 SUPERFAMILY MFS general substrate transporter 43 396 IPR036259 -
Cone3ag0960 401 Gene3D MFS general substrate transporter like domains 12 213 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0960 Cone-Chr3:5472731 Cone7ag0598 Cone-Chr7:2876639 7.52E-76 dispersed
Cone3ag0960 Cone-Chr3:5472731 Cone2ag0382 Cone-Chr2:2013854 7.11E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag0960 - - - 0.0