Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1002 ATGGCACCGGAAGAGGCAGCACCACTACTATGCACCGGGGTGACAGCATATAGCCCACTGAGCCACTTTGGGCTGAAGCAGAGTGGACTAAGAGGTGGGATATTGGGCCTGGGAGGAGGTGGACATATGGGGGTGAAGATAGCAAAGGCAATGGGTCACCATGTGACAGTCATAAGCTCTTCTTATAAGAAAAGAGAGGAAGCTTTGGGACATCTTGGAGCTGATGAGTACCTGGTCAAATCGGACATAACTCGGATGCAAGAAGCACCTCACTCACTTGATTATATCATTGACATAGTGCCTGTGAACCATCCTCTTGAGCCTCACCTATCTCTACTTAAGCTTGATGGGAAATTGATCTTGATGGGTGTTATTAGTTCCCCTCTCCAATTTGTCTCTCGCTTGCTCCTTCTCGGAAGGAAAACAATAACAGGGAGCTTCATAGGAAGCATGAAGGAGCTTCAAGAAATATTGGAACTCTTCAAAGAGAAAGAATTGACCTCGACGGTTGAAGTCGTCCAGTTAAACATCAACAAGGCTTTTGAACGATTAGAGAAGAATGATGTGAGGTACCGATTTGTCATTGATGTTGACATCAACAAGGCTTGTGTTTCCTTTGTTTGTCAATCGTTGTCCATTTTTTAA 645 44.81 MAPEEAAPLLCTGVTAYSPLSHFGLKQSGLRGGILGLGGGGHMGVKIAKAMGHHVTVISSSYKKREEALGHLGADEYLVKSDITRMQEAPHSLDYIIDIVPVNHPLEPHLSLLKLDGKLILMGVISSPLQFVSRLLLLGRKTITGSFIGSMKELQEILELFKEKELTSTVEVVQLNINKAFERLEKNDVRYRFVIDVDINKACVSFVCQSLSIF 214
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
3 28822246 28823246 - Conep03aG0150100.1 Cone3ag1002 434461
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1002 214 Gene3D - 3 194 - -
Cone3ag1002 214 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 166 IPR036291 -
Cone3ag1002 214 FunFam Cinnamyl alcohol dehydrogenase 12 168 - -
Cone3ag1002 214 Gene3D - 12 168 - -
Cone3ag1002 214 PANTHER ALDEHYDE REDUCTASE 2 198 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
Cone3ag1002 214 Pfam Zinc-binding dehydrogenase 41 162 IPR013149 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1002 Cone-Chr3:28822246 Cone8ag0057 Cone-Chr8:295123 1.42E-60 dispersed
Cone12ag1069 Cone-Chr12:8816572 Cone3ag1002 Cone-Chr3:28822246 2.31E-110 wgd
Cone3ag1002 Cone-Chr3:28822246 Cone8ag1104 Cone-Chr8:9854077 2.62E-108 wgd
Cone3ag1002 Cone-Chr3:28822246 Cone9ag1351 Cone-Chr9:10131797 4.27E-08 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1002 K00083 - csv:101222395 289.271