Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag1040 | ATGTTGAGAAACCATCTTCCTCACCCACTCAAACCGGGTCCACCTCCACCCGATGAGGAATCCGATCCCACCCGATCCACCTTCGCCGGTTTGAACCTCTCACTAGGGATCGGACTCCGCAAGAAGGGAACTGGAATCCGGCCATGGCTTCTTCTAGACTCCACCGGTCGAGCTCAGGTGGTCGAAGTCGGAAAGCACATAATCATGCGCCGGACGGGTTTACCTGCCCGAGACCTTCGGATCTTGGACCCGATGCTTTCCTACCCGTCAACGATTCTTGGTCGTGAAAGAGCCATCGTGATCAATCTTGAGCACATCAAAGCGATCATAACTGCTCAGGAAGTGCTCTTGTTGAATTCTAGGGATCCGTCTGTGACGCCGTTTGTTGAGGAGCTTGGACGGCGGTTGATTCGTCACCATCACGCCACTACAGCTCAGGAGGGAAATGGAGATGATTCGAACTGGAAAAATATGTACGATTTGGAGGAACCTCGATCTCGAGCATTAAGTCCTCAAAATTCACCTCATGGATTTCCTATGAACCGAGAAGAGGATAATGGAAAGGAAGGAGGGGGTAAACAACTTGATAATCTTGATGGATCGAAGGTTCTTCCATTTGAATTTGTTGCGTTGGAAGCTTGTCTTGAAGCTGCTTGTAGTTGCTTAGAAAGTGAGGCAAGGACATTGGAGCTAGAGGCTCATCCGGCTTTGGATAAGCTTACTTCAAAGATCAGTACACTCAATTTGGAACGGGTCCGTCAAATAAAAAGCCGTTTGGTCGCAATAACCGGACGGGTTCAAAAGGTAAGAGATGAATTAGAACATTTGTTAGATGACGATGAAGATATGGCTGAGATGTATTTGACAGAGAAGCTTATTCAACAAGACCTTGAAAACTCCTCTGCTTCCTCAATTAATGAAAAAGAGGAGATGGATTCTGGAGTTCTTCAACCAGATGTGGATAGAATGGCTACTGAATTCTCTTTGGAAGGTGGTGGGGTTTCCGTGAATTACGACTGCGAACAAGATCAATTGTTCAGTGCACCTAATATGATCGGAAAGGACAGCCATGGGACCCACACGAGCATTTCTCACAGTGCCATAACCAAGAATCTTGATGTAGAAGAGCTTGAAATGTTGCTTGAGGCATACTTTGTACAAATCGATGGAACACTGAACAAACTGTCCACGAATCATCTTCTCCAAATGGGAGTCATGTTAACAACAGCAACGCTTGTCGTCAGCGCCTTTGTAGTTGTGGCTGGGGTTTTCGGAATGAATATCCACATCGAACTCTTCGATGAAGAAAAAGCCGGTATGCCACAATTTCTTTGGACAGTTGGCGGTGGGACTGCAGGGAGTCTCTTCTTGTATGTGGTTGCCATTGCTTGGTGTAGGCACAGACGCTTGCTCGAATAG | 1419 | 46.86 | MLRNHLPHPLKPGPPPPDEESDPTRSTFAGLNLSLGIGLRKKGTGIRPWLLLDSTGRAQVVEVGKHIIMRRTGLPARDLRILDPMLSYPSTILGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEELGRRLIRHHHATTAQEGNGDDSNWKNMYDLEEPRSRALSPQNSPHGFPMNREEDNGKEGGGKQLDNLDGSKVLPFEFVALEACLEAACSCLESEARTLELEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLIQQDLENSSASSINEKEEMDSGVLQPDVDRMATEFSLEGGGVSVNYDCEQDQLFSAPNMIGKDSHGTHTSISHSAITKNLDVEELEMLLEAYFVQIDGTLNKLSTNHLLQMGVMLTTATLVVSAFVVVAGVFGMNIHIELFDEEKAGMPQFLWTVGGGTAGSLFLYVVAIAWCRHRRLLE | 472 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 29212260 | 29215372 | - | Conep03aG0154100.1 | Cone3ag1040 | 434499 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag1040 | 472 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 38 | 470 | IPR039204 | GO:0015095(PANTHER)|GO:0015693(PANTHER) | |
| Cone3ag1040 | 472 | FunFam | Magnesium transporter MRS2-1 | 37 | 120 | - | - | |
| Cone3ag1040 | 472 | Gene3D | Magnesium transport protein CorA, transmembrane region | 180 | 403 | - | - | |
| Cone3ag1040 | 472 | Pfam | Magnesium transporter MRS2-like | 52 | 132 | - | - | |
| Cone3ag1040 | 472 | Pfam | Magnesium transporter MRS2-like | 201 | 295 | - | - | |
| Cone3ag1040 | 472 | Gene3D | - | 39 | 120 | - | - | |
| Cone3ag1040 | 472 | MobiDBLite | consensus disorder prediction | 164 | 196 | - | - | |
| Cone3ag1040 | 472 | CDD | Mrs2_Mfm1p-like | 49 | 470 | IPR039204 | - | |
| Cone3ag1040 | 472 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag1040 | Cone-Chr3:29212260 | Cone7ag1020 | Cone-Chr7:7874808 | 7.93E-81 | dispersed | |
| Cone3ag1040 | Cone-Chr3:29212260 | Cone8ag1071 | Cone-Chr8:9710444 | 1.24E-66 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag1040 | - | - | - | 0.0 |