Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1088 ATGGAAAGCCTCGCCCTCAACTCCCTCTCCACCTTCTCCCCTCCTTCTTTCTCCTCCCTCTCTGTCTCCCTCCGCCGATCCCGATCCCGATCCTCCATTCCCCAGACCCAATCAACAACAATCAGCTCACCTCTACTTTCCTTCTCCTCAATCCCTACTAATCTCCTCAATTTCCCTCCAAAACCTCTCTTCTATAATCACCTTAAAAAATCCCCCAAATTCCTTCCTCCAATTCGCGCTTCTCAATCCCTTACCGCTCAATTTTCATCCCCTCCTCCTCCTCCTCCTCCTCCTCAAGGAGCGAAACCGATCCCCTTGATTATCTCGATCGCAGTCGGCCTCCTTCTCCGATTTCTCGTTCCCAAACCAGTCGAAGTTTCGCCTCAAGCATGGCAGCTACTCTCAATATTCATCTCAACCATCGCTGGCCTCGTCTTAAGCCCCTTACCAGTCGGCGCTTGGGCATTTCTAGGGCTGACTACTTCGATCGTGACCAGAACGCTGTCTTTTTCGTCTGCGTTCAGCGCTTTTACTAACGAGGTGATTTGGTTGATTGTGATTTCCTTCTTCTTCGCTCGTGGATTTGTGAAGACTGGATTGGGAGATAGAATCGCGACTTATTTCGTTAAGTGGTTGGGAAAGAGTACTTTGGGATTGTCATATGGATTGACGATTAGTGAGGCTTTGATCGCTCCGGCAATGCCAAGTACTACGGCTAGGGCTGGCGGTGTGTTCTTGCCGATCATTAAGTCATTGTCTTTATCGGCAGGAAGTAAACCTGGTGACTCTTCTGTTAGGAAGATTGGGTCTTATCTAATTCAGTCTCAGTTTCAGTCTGCTGGTAACTCTAGTGCTCTTTTCCTAACTGCTGCAGCTCAAAACTTGCTATGCCTTAAACTAGCTGAAGAACTTGGGGTCGTTATTTCTAGCCCTTGGGTTTCTTGGTTCAAGGCTGCTAGTTTACCTGCGCTCGTTTCTCTTCTGGTTACTCCTCTAGTCTTATACAAGCTTTATCCTCCTGAAACCAAAGACACGCCTGAAGCCCCAGCAATGGCAGCAAAGAAGCTTGAACGTATGGGCCCCGTCACAAAGAATGAATGTGTTATGATTGGAACAATGCTTCTAGCAGTTTCTCTATGGGTATTTGGAGATAAGCTCAGTATCCCTAGTGTTGTCGCGGCAATGATTGGATTATCAATTCTTCTTTTATCAGGAGTCCTTGATTGGGATGACTGTTTAAGCGAGAAATCAGCATGGGACACCTTAGCCTGGTTTGCGGTCCTAGTAGGCATGGCCAGTCAATTAACCAATCTCGGAATTGTATCCTGGATGTCCAAATGTGTGGCCAAGTGTCTTCAATCTTTCTCTTTAAGCTGGCCGGCTGCTTTTGGTGTTCTTCAGGCAGCTTATTTCTTCATTCACTACCTCTTTGCTAGTCAAACCGGTCATGTCGGAGCCTTATATTCTGCTTTTCTTGCTATGCATATAGCAGCTGGAGTTCCAGCTATTCTGGCCGCTCTAGCTTTAGCCTATAATACGAATCTTTTCGGTGCTCTAACGCATTATAGTAGCGGCCAGGCTGCTGTTTACTATGGAGCTGGGTATGTAGACCTACCGGATGTGTTCAAGGTGGGATTCATTATGGCGCTTATTAATGCCGTCATTTGGGCACTAGTTGGAAGTTTATGGTGGAAATTTCTGGGTCTTTATTAA 1713 46.76 MESLALNSLSTFSPPSFSSLSVSLRRSRSRSSIPQTQSTTISSPLLSFSSIPTNLLNFPPKPLFYNHLKKSPKFLPPIRASQSLTAQFSSPPPPPPPPQGAKPIPLIISIAVGLLLRFLVPKPVEVSPQAWQLLSIFISTIAGLVLSPLPVGAWAFLGLTTSIVTRTLSFSSAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLSYGLTISEALIAPAMPSTTARAGGVFLPIIKSLSLSAGSKPGDSSVRKIGSYLIQSQFQSAGNSSALFLTAAAQNLLCLKLAEELGVVISSPWVSWFKAASLPALVSLLVTPLVLYKLYPPETKDTPEAPAMAAKKLERMGPVTKNECVMIGTMLLAVSLWVFGDKLSIPSVVAAMIGLSILLLSGVLDWDDCLSEKSAWDTLAWFAVLVGMASQLTNLGIVSWMSKCVAKCLQSFSLSWPAAFGVLQAAYFFIHYLFASQTGHVGALYSAFLAMHIAAGVPAILAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLPDVFKVGFIMALINAVIWALVGSLWWKFLGLY 570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29508565 29512056 - Conep03aG0159200.1 Cone3ag1088 434547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1088 570 Pfam Sodium:sulfate symporter transmembrane region 105 569 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone3ag1088 570 NCBIfam DASS family sodium-coupled anion symporter 122 564 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone3ag1088 570 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 21 570 IPR030676 GO:0005215(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1489 Cone-Chr11:10543330 Cone3ag1088 Cone-Chr3:29508565 8.90E-164 dispersed
Cone18ag0105 Cone-Chr18:543277 Cone3ag1088 Cone-Chr3:29508565 4.06E-162 dispersed
Cone3ag1088 Cone-Chr3:29508565 Cone3ag1151 Cone-Chr3:30131087 5.69e-311 dispersed
Cone10ag0946 Cone-Chr10:4987307 Cone3ag1088 Cone-Chr3:29508565 0 wgd
Cone3ag1088 Cone-Chr3:29508565 Cone8ag1013 Cone-Chr8:9423983 2.37E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1088 - - - 0.0