Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1093 ATGGATAGTCTATGTTGCTTCAATTCTGTTTACTCTCAGGTTGTTGGAGGGCGCTCGTCATGTAGCTCCGGAAAGGGAAGAGGGCATCTGAGCCCTGTCAAGTATGGATTTAGCTTAGTTAAAGGGAAAGCAAATCATCCCATGGAGGATTATCATGTGGCCAAGTTCATTCAGTTGCGAGGCCAGGAAGTTGGCCTCTTTGCTATATATGATGGTCATTTGGGAGATAGTGTACCTGCTTATCTACAAAAGCATCTCTTTCCTAATATTATAAAGGATAAGGAGTTTTGGAGTGATCCGAATAGGTCTATCAATAAAGCCTACGAGATGACGGACCAAGCAATCCTCTCACACAGTCCAGAGTTGGGAAGAGGTGGATCCACTGCAGTTACCGCCATTCTGATAAATGGTCAGAAATTATGGGTAGCAAATGTCGGAGATTCTCGGGCAGTTATTTCAAAGAAAGGGCAAGCAGAGCAGATGACTACAGACCATGAGCCAAATACTGAGCGGGGCAGCATTGAGAACAGGGGCGGATTTGTCTCAAATATGCCAGGTGACGTGGCAAGGGTAAATGGCCAGCTGGCAGTCTCTCGAGCCTTTGGGGACAAGAACCTGAAAACACATTTGCGATCTGATCCCGACATTCAAACTGCTGATATCGGCCCCGATTACGATCTTCTTATTCTAGCAAGTGACGGTCTATGGAAGGTTATGGCAAATCAAGAAGCGGTTGATATAGCAAAAAGGACTAAAGACCCGCAAAGGGCAGCTAAGCAATTAGCAGCCGAGGCTTTGAAGCGGGAAAGTAAGGATGATATCTCAATCATAGTTGTTCGTTTCAAGGGTTAA 852 45.54 MDSLCCFNSVYSQVVGGRSSCSSGKGRGHLSPVKYGFSLVKGKANHPMEDYHVAKFIQLRGQEVGLFAIYDGHLGDSVPAYLQKHLFPNIIKDKEFWSDPNRSINKAYEMTDQAILSHSPELGRGGSTAVTAILINGQKLWVANVGDSRAVISKKGQAEQMTTDHEPNTERGSIENRGGFVSNMPGDVARVNGQLAVSRAFGDKNLKTHLRSDPDIQTADIGPDYDLLILASDGLWKVMANQEAVDIAKRTKDPQRAAKQLAAEALKRESKDDISIIVVRFKG 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 29567925 29571034 - Conep03aG0159700.1 Cone3ag1093 434552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1093 283 CDD PP2Cc 33 281 IPR001932 -
Cone3ag1093 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Cone3ag1093 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Cone3ag1093 283 SUPERFAMILY PP2C-like 29 282 IPR036457 -
Cone3ag1093 283 Gene3D - 29 283 IPR036457 -
Cone3ag1093 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Cone3ag1093 283 SMART PP2C_4 30 279 IPR001932 -
Cone3ag1093 283 MobiDBLite consensus disorder prediction 154 176 - -
Cone3ag1093 283 PANTHER PROTEIN PHOSPHATASE 34 279 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone3ag1093 283 FunFam Probable protein phosphatase 2C 39 26 282 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1218 Cone-Chr17:8842993 Cone3ag1093 Cone-Chr3:29567925 2.02E-143 dispersed
Cone20ag0507 Cone-Chr20:2741321 Cone3ag1093 Cone-Chr3:29567925 1.12E-124 dispersed
Cone3ag1093 Cone-Chr3:29567925 Cone4ag1335 Cone-Chr4:10921634 9.15E-148 dispersed
Cone10ag0938 Cone-Chr10:4906845 Cone3ag1093 Cone-Chr3:29567925 1.63E-194 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1093 K17506 - csv:101214223 488.419