Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1151 ATGTTACTCCCCAAATTCCTTCGGCCTATTCGCGCCTCTCAGTCCCTAACCGCCCCATCTTCATCCCCTCCCTCTCCTCCTCATCAAGGAGTAAAACTCCTCCCCTTGATAATCTCGATCACAATCGGCCTCCTTCTCCGATTCCTAGTTCCCAAGCCGGTCGAAGTTTCGCCTCAAGCATGGCAGCTACTCTCGATCTTCGTCTCAACCATCGCCGGCCTCGTCTTAAGGCCCTTACCAGTCGGCGCTTGGGCGTTTCTAGGGCTAACTACAGCGATCGTGACCAAAACGCTGTCATTTTCATCTGCATTCAGTGCTTTCACTAACGAGGTGATTTGGTTGATTGTGATTTCTTTCTTCTTCGCTCGTGGATTTGTCAAGACTGGATTGGGAGATAGAATCGCGACTTATTTCGTGAAGTGGTTGGGGAAGAGTACTTTGGGATTGTCATATGGATTGACGATTAGTGAGGCTTTGATCGCTCCGGCAATGCCAAGCAGTACGGCTAGGGCTGGTGGTGTGTTCTTGCCCATTATCAAGTCATTATCTTTATCGGCAGGGAGTAAACCCGGTGATCCATCTGCTAGGAAGATTGGCTCTTATCTAATTCAGTCTCAGTTTCAGTCTGCTGGTAATTCTAGTGCTCTTTTCCTGACTGCTGCAGCTCAAAACTTGCTATGCCTTAAACTAGCCGAAGAACTTGGGGTCGTTATTTCTAGCCCTTGGATCTCTTGGTTCAAGGCTGCTAGTTTACCCGCGCTCGTTTCTCTTCTGGCGACTCCACTAGTCTTATACAAACTTTATCCTCCTGAAACCAAAGACTCACCTGAAGCCCCTGCAATGGCTGCAAGGAAACTCGAGCGCATGGGCCCTGTCACAAAGAATGAATGGATCATGGTTGGAACGATGCTTCTAGCAGTTTCTCTATGGGTCTTTGGAGATAAGCTTGGTATCCCTAGTGTTGTTGCGGCAATGATCGCATTATCAATACTCCTTTTATTAGGAGTCCTTGATTGGGATGACTGTTTAAGCGAGAAATCAGCATGGGACACCTTAGCCTGGTTTGCGGTCCTAGTAGGCATGGCCAGTCAATTAACCAAACTCGGATTTGTGACCTGGATGTCCAAACGTGTGGCCAAGTCTATTCAATCTTTCTCTCTAAGCTGGCCGGCTGCTTTTGGTGTTCTTCAGGCAGCTTATTTCTTGATTCACTACCTCTTTGCTAGTCAAACCGCTCATGTCGGAGCGTTATATTCTGCTTTTCTTGCTATGCATTTAGCAGCTGGAGTTCCAGCTCTTATGGCCGCTCTAGCTTTAGCTTATAATACGAATCTTTTCGGTGCTCTAACGCATTATAGTAGCGGCCAGGCTGCTGTTTACTATGGAGCTGGGTATGTAGACCTACTGGATATGTTCAAGGTGGGATTCATTATGGCGCTTATCAATGCCGTACTCTGGGGAGTAGTTGCTGGTTTATGGTGGAAGATTCTGGGTCTTTATTAA 1503 47.37 MLLPKFLRPIRASQSLTAPSSSPPSPPHQGVKLLPLIISITIGLLLRFLVPKPVEVSPQAWQLLSIFVSTIAGLVLRPLPVGAWAFLGLTTAIVTKTLSFSSAFSAFTNEVIWLIVISFFFARGFVKTGLGDRIATYFVKWLGKSTLGLSYGLTISEALIAPAMPSSTARAGGVFLPIIKSLSLSAGSKPGDPSARKIGSYLIQSQFQSAGNSSALFLTAAAQNLLCLKLAEELGVVISSPWISWFKAASLPALVSLLATPLVLYKLYPPETKDSPEAPAMAARKLERMGPVTKNEWIMVGTMLLAVSLWVFGDKLGIPSVVAAMIALSILLLLGVLDWDDCLSEKSAWDTLAWFAVLVGMASQLTKLGFVTWMSKRVAKSIQSFSLSWPAAFGVLQAAYFLIHYLFASQTAHVGALYSAFLAMHLAAGVPALMAALALAYNTNLFGALTHYSSGQAAVYYGAGYVDLLDMFKVGFIMALINAVLWGVVAGLWWKILGLY 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 30131087 30136998 - Conep03aG0165600.1 Cone3ag1151 434610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1151 500 NCBIfam DASS family sodium-coupled anion symporter 52 494 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone3ag1151 500 PIRSF DASS 19 500 IPR030676 -
Cone3ag1151 500 Pfam Sodium:sulfate symporter transmembrane region 33 499 IPR001898 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cone3ag1151 500 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 15 500 IPR030676 GO:0005215(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1088 Cone-Chr3:29508565 Cone3ag1151 Cone-Chr3:30131087 5.69e-311 dispersed
Cone3ag1151 Cone-Chr3:30131087 Cone8ag1013 Cone-Chr8:9423983 2.02E-276 dispersed
Cone10ag0946 Cone-Chr10:4987307 Cone3ag1151 Cone-Chr3:30131087 4.89e-312 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1151 - - - 0.0