Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag1185 | ATGGGTAGCCATGGTGATCAAAACGAAGCAGGAAGACACCAAGAAGTTGGTCATAAGAGTCTTTTGCAGAGCGATGCTCTTTACCAGTATATATTGGAGACAAGTGTGTACCCAAATGAGCCTGAACCCATGAGGGAACTCAGAGAATTGACGGCCAAGCATCCATGGAACTTAATGACGACCTCGGCCGATGAGGGGCAGTTCTTGAACATGCTATTGAAGCTCATAAATGCCAAGAACACGATGGAGATTGGAGTCTTTACCGGCTACTCCCTCCTCGCCACGGCCCTTGCTCTTCCCGACGACGGAAAGATATTTGCTATGGACATCAACAAAGAAAATTACGAATTGGGCCTTCCCGTGATCCAAAAGGCCGGTGTTGCTCACAAGATCGTTTTCAAGGAAGGCCCAGCCCTCCCCGTTCTCGATCAACTTCTTGAAGATGAGAAGAACCATGGAAGCTACGACTTCATCTTCGTTGATGCTGATAAGGACAACTACATAAATTACCACAAGAGGCTGATCGACTTGGTCAAAGTAGGGGGTTTAATCGGCTACGACAACACTCTATGGAACGGCTCTGTGGTGGCCCCACCTGATGCACCACTACGTAAATATGTCAGGTATTATAGAGACTTTGTTCTGGAGCTCAACAAGGCCCTCGCTGCTGACCCTAGGATTGAGATCTGCATGCTCCCCGTTGGTGATGGAATCACTCTCTGCCGTCGGATCAAGTGA | 738 | 48.51 | MGSHGDQNEAGRHQEVGHKSLLQSDALYQYILETSVYPNEPEPMRELRELTAKHPWNLMTTSADEGQFLNMLLKLINAKNTMEIGVFTGYSLLATALALPDDGKIFAMDINKENYELGLPVIQKAGVAHKIVFKEGPALPVLDQLLEDEKNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGLIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAADPRIEICMLPVGDGITLCRRIK | 245 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 30530874 | 30532360 | + | Conep03aG0169200.1 | Cone3ag1185 | 434644 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag1185 | 245 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 20 | 244 | IPR002935 | GO:0008171(InterPro) | |
| Cone3ag1185 | 245 | PANTHER | O-METHYLTRANSFERASE-RELATED | 17 | 244 | IPR050362 | GO:0008757(PANTHER) | |
| Cone3ag1185 | 245 | FunFam | Caffeoyl-CoA O-methyltransferase 1 | 13 | 245 | - | - | |
| Cone3ag1185 | 245 | CDD | AdoMet_MTases | 86 | 184 | - | - | |
| Cone3ag1185 | 245 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 24 | 243 | IPR029063 | - | |
| Cone3ag1185 | 245 | Gene3D | Vaccinia Virus protein VP39 | 19 | 245 | IPR029063 | - | |
| Cone3ag1185 | 245 | Pfam | O-methyltransferase | 33 | 244 | IPR002935 | GO:0008171(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag1185 | Cone-Chr3:30530874 | Cone8ag1124 | Cone-Chr8:9929186 | 7.58E-161 | dispersed | |
| Cone3ag1185 | Cone-Chr3:30530874 | Cone19ag0420 | Cone-Chr19:3480860 | 7.14E-77 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag1185 | K00588 | - | mdm:103448267 | 458.373 |