Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1270 ATGAGGAGGCTAAAGAAAACTTCTCCCTTTTATTTCCTATCATCTTTCCTTATATTCTCCTTATTCAATCAAAGTTCCACATCTTCAAGCGTTAAAAAGTCATACGTCGTCTACATGGGAGCCCATTCACAAAACCCAGAACTTTCTTCAATCGACTCGAACCAAGTGAGAAATTCCCACTATGAGTTTCTAGAATCATTCCTGGGAAGCCATGATCCTGCTAAAGAAGCTATCTTCTACTCATATACAAAACACATTAATGGCTTTGCTGCCTTGTTAAAAGATCATGTAGCCGAACAGATATCTAGGCATCCAAAAGTAGTGTCAGTGTTTTTGAACAAGGGGAGAAAGTTACACACTACTAGGTCATGGGAATTTATGGGACTCGAGCAAAATGGTGTCATCATTTCAAACTCGATTTGGAAGAAGGCAAGGTATGGCGAAGATACGATCATTGGAAACCTCGATACTGGCGTGTGGCCAGAATCGAAAAGCTTTAGTGACGAAGAGTCGGGACCGATTCCGTCAAGGTGGAAAGGAACCTGCCAAAACAATACAGACGCTTCATTTCATTGCAATAGGAAGCTAATTGGAGCAAGATACTTCAACAAAGGATATGCATCAGTAGCCGGGCCTCTCAACTCCAACTTCGATTCACCTAGAGATAATGAAGGCCATGGCACTCACACACTATCAACTGCTGGGGGTAATTTCGTAAATGGGGCAAGTGTGTTCGGCTTCGGCCAAGGCACGGCAAAAGGTGGGTCCCCAAAAGCTCGGGTAGCAACTTACAAGGTATGTTGGCCCCCGATTGGTGGAAACGAATGCTTCGATGCAGATATCTTGGCAGCCTTTGACATGGCTATCCATGATGGAGTAGATGTCTTGTCGGTCTCCTTAGGAGGGGATCCCACCTCTTTTTTCAATGACAGTGTCGCTATTGGCTCGTTTCATGCGGTTAAGCACGGAATTGTGGTGATTTGTTCGGCTGGAAATTCTGGACCTTCTCCTGGAACCGTTGTTAATCTTGCACCATGGGAGATCACTGTTGGAGCCAGTACCATGGATAGGGAGTTCCGCAGTTATGTTGTCCTTGGTAATGAGAAACACATTGAGGGGGAAAGTTTATCACCTAAGGCCTTACCAGGCAAGAAATTCTACCCGCTCATTAGCGCTGCAGATGTTAAATTGGCAAATGCATCAACTGACCAAGCTTTGCTATGTAAAGCTGGTACACTTGATCCTAGAAAGGCGAAGGGAAAGATCTTGGTGTGCCTTCGTGGTGATAATGCAAGAGTGGATAAAGGAGAGCAAGCCTTATTGGTAGGTGCTGTAGGAATGATCCTTGCCAATGGCAATCTTAGCGGGAATGAAATACTTGCTGATCCACATGTCCTTCCAGCTTCACATATCAACTTCACTGATAGCGTGGCTGTCTCAGTTTACCTCAATTCAACCAAGTCTCCTAAGGCTTATATAACACGTCCAACAACTCACTTGGGTACGAAGCCAGCTCCGTTCATGGCAGCTTTTTCATCAAAGGGACCTAATACTATCACCCCGCACATCCTAAAGCCCGATATCACAGCACCGGGAGTAAGTGTCATAGCTGCTTATACTGAAGCTCAAGGGCCAACTAATCAACAATTTGATGAACGGCGAGTACAGTTCAACTCAATATCTGGAACTTCAATGTCATGTCCACATGTTTCTGGTGTCATCGGCCTTCTCAAAACCCTCTATCCTAATTGGAGTCCGGCAGCTATTAAATCAGCAATCATGACAACCTCTACCACATTTGATAACAGGAGGGAACCAATACTCAATGCTTCGTATTACAAGGCCACACCATTCAGTTATGGAGCAGGACACATCCAACCGAACAGTGTCGTGGACCCTGGCCTGGTTTACGACATAGATGTGAAAGACTACCTTAATTTTCTATGTGCGTTGGGATACAATGAAACTCAACTTTCATTATTTTCAGGTGGCCCTTATACATGTCATAAGCCAATTAACCAAATCGATCTTAATTACCCCTCAATTACAGTTCCTCAACTCTCTAGCTCAATTACGGTTACTAGAACACTAAAGAATGTAGGTTCTCCAGGAACATATAATGCCCGTGTAAGAAAACCATATGGCATTACGGTTTTCATCAATCCAAAGAGCTTGAACTTCACAGATATTGGTGAAGAAAAGAGGTTTGACATTACCCTGAAGATCAAGAAAGCTACAGTGAGTAAGGACTATGTATTTGGCGAAGTGGAATGGTCTGATGGTAAACACTATGTGAGGAGCCCTATCGTTGTAAAGGCAATCTAG 2325 43.87 MRRLKKTSPFYFLSSFLIFSLFNQSSTSSSVKKSYVVYMGAHSQNPELSSIDSNQVRNSHYEFLESFLGSHDPAKEAIFYSYTKHINGFAALLKDHVAEQISRHPKVVSVFLNKGRKLHTTRSWEFMGLEQNGVIISNSIWKKARYGEDTIIGNLDTGVWPESKSFSDEESGPIPSRWKGTCQNNTDASFHCNRKLIGARYFNKGYASVAGPLNSNFDSPRDNEGHGTHTLSTAGGNFVNGASVFGFGQGTAKGGSPKARVATYKVCWPPIGGNECFDADILAAFDMAIHDGVDVLSVSLGGDPTSFFNDSVAIGSFHAVKHGIVVICSAGNSGPSPGTVVNLAPWEITVGASTMDREFRSYVVLGNEKHIEGESLSPKALPGKKFYPLISAADVKLANASTDQALLCKAGTLDPRKAKGKILVCLRGDNARVDKGEQALLVGAVGMILANGNLSGNEILADPHVLPASHINFTDSVAVSVYLNSTKSPKAYITRPTTHLGTKPAPFMAAFSSKGPNTITPHILKPDITAPGVSVIAAYTEAQGPTNQQFDERRVQFNSISGTSMSCPHVSGVIGLLKTLYPNWSPAAIKSAIMTTSTTFDNRREPILNASYYKATPFSYGAGHIQPNSVVDPGLVYDIDVKDYLNFLCALGYNETQLSLFSGGPYTCHKPINQIDLNYPSITVPQLSSSITVTRTLKNVGSPGTYNARVRKPYGITVFINPKSLNFTDIGEEKRFDITLKIKKATVSKDYVFGEVEWSDGKHYVRSPIVVKAI 774
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 31530079 31534810 + Conep03aG0177700.1 Cone3ag1270 434729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1270 774 ProSiteProfiles Serine proteases, subtilase domain profile. 123 631 - -
Cone3ag1270 774 PRINTS Subtilisin serine protease family (S8) signature 147 166 IPR015500 -
Cone3ag1270 774 PRINTS Subtilisin serine protease family (S8) signature 561 577 IPR015500 -
Cone3ag1270 774 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Cone3ag1270 774 Gene3D - 356 500 - -
Cone3ag1270 774 SUPERFAMILY Subtilisin-like 118 635 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone3ag1270 774 CDD PA_subtilisin_like 362 493 - -
Cone3ag1270 774 Pfam PA domain 404 475 IPR003137 -
Cone3ag1270 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 562 572 IPR023828 -
Cone3ag1270 774 FunFam Subtilisin-like protease SBT1.5 149 367 - -
Cone3ag1270 774 FunFam Subtilisin-like protease SBT5.3 23 119 - -
Cone3ag1270 774 Pfam Peptidase inhibitor I9 34 119 IPR010259 -
Cone3ag1270 774 FunFam subtilisin-like protease SBT1.5 356 500 - -
Cone3ag1270 774 Pfam Subtilase family 147 621 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone3ag1270 774 Pfam Fibronectin type-III domain 676 771 IPR041469 -
Cone3ag1270 774 CDD Peptidases_S8_3 117 598 IPR034197 -
Cone3ag1270 774 FunFam p69E protein-like 648 774 - -
Cone3ag1270 774 Gene3D - 648 774 - -
Cone3ag1270 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 770 IPR045051 -
Cone3ag1270 774 Gene3D Peptidase S8/S53 domain 149 644 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone3ag1270 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 119 IPR037045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1261 Cone-Chr14:10121786 Cone3ag1270 Cone-Chr3:31530079 0 dispersed
Cone1ag0378 Cone-Chr1:3222659 Cone3ag1270 Cone-Chr3:31530079 3.05E-174 dispersed
Cone3ag1212 Cone-Chr3:30841286 Cone3ag1270 Cone-Chr3:31530079 9.01E-184 dispersed
Cone3ag1270 Cone-Chr3:31530079 Cone6ag1192 Cone-Chr6:9204633 0 dispersed
Cone3ag1270 Cone-Chr3:31530079 Cone15ag1283 Cone-Chr15:10064682 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1270 - - - 0.0