Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1324 ATGAAGGCTTTAACAATGAGCATTTCACATGGACTGTCATCATCATCATCATCATCATCATCACCGGCATCGTCAGCACCACTATCTTCACCGGCAACTAGCTTGCCGCTCCGTGCTATTCCTGGCGGTTACGGGTGGGCTATTCTAGGACCCTTATCAGACCGATTGGACTACTTCTGGTTTAAAGGTCCTGAAACTTTTTTCAAGGAGAGAATTGACAAGTACAAGAGCACGGTTTTCCGAACCAATATCCCACCAACCTTTCCCTTCTTCCGCAAAGTAAACCCGAACGTCGTCGCCTTACTAGATTGCAAGTCGTTCGCACATATTTTCGACATGGATATCGTCGAAAAAAGGAATGTCCTCGTCGGAGACTTCATGCCTAGCGTTAGCTTCACAGGGGATACTAGGGTTTGTGCTTATCTTGATACTTCTGAGCCTCAACATTCCAAGATCAAGAGCTTCGCTATGGACATTCTAAAGCGAAGCTCGAAGATTTGGGCCCGAGAAGTGAGCACTAACCTTGACACAATGTGGGACACAATCGAATCCGAAGTGTCTAAATCCGGCAAAGCCTCGTATATCATCCCACTGCAAAAATTCATCTTCGATTTTCTTTGCAAATGCTTGGTTGGAGCCGATCCCTCGACCTCTCCAGAAGTGGCTGAATCTGGCTACGCAATGCTTGATCGTTGGCTCGCCCTTCAGGTCCTTCCGACCGTAAAGATCGGAGTCCTTCAGCCCCTTGAAGAAATTTTTCTTCACTCTTTTGCATACCCTTATGGATTGGTTAGTGGAGATTACAACAAACTATCTGCGTTCATCGAAAAAGAAGGGAAAGAAGTATTACAAAGAGGACAAACTGAGTTCGGATTGAGCCGGGAAGAAGCGATTCACAACCTTTTCTTCATACTAGGTTTCAATGCATTTGGTGGCTTCTCTGTTTTCCTGCCGACTCTCCTCAGCACTCTAGCTAGTGACAAAACCGGTCTACAACAAAAGCTTGTAAAAGAAGTAAGAGAAAAAGCTGGTTCAACTCTTAGTTTTGACTCCATAAAACAATTGGAACTTGTTAACTCGGTGGTGTATGAGACACTCCGACTCAACCCACCGGTCCCGCTCCAGTTCGCCCGAGCCAGGAAAGATTTCCAACTGAGTACTTATGACTCGGCCTTTGACATCAAAAAGGGGGAGTTGCTATGCGGGTATCAACCCCTGGTGATGAAGGATCCAAAAGTTTTTGACGAACCGGAGACATTCAAACCGGACCGGTTCATGGAAGATAAAGGAGCCGAGTTGTTGAACTACTTGTACTGGTCGAATGGGCCGCAGACCAATACGCCGACCGTGTCGAATAAACAATGTGCTGGTAAAGATTACGTCGTCATGACGGCATCTTTGTTTGTGGCTCACTTGTTTCAGAGGTATGACTCGGTGATGGGTGATTCGTCATCAATCACAGCATTTGAAAAGAACAACTAA 1482 45.95 MKALTMSISHGLSSSSSSSSSPASSAPLSSPATSLPLRAIPGGYGWAILGPLSDRLDYFWFKGPETFFKERIDKYKSTVFRTNIPPTFPFFRKVNPNVVALLDCKSFAHIFDMDIVEKRNVLVGDFMPSVSFTGDTRVCAYLDTSEPQHSKIKSFAMDILKRSSKIWAREVSTNLDTMWDTIESEVSKSGKASYIIPLQKFIFDFLCKCLVGADPSTSPEVAESGYAMLDRWLALQVLPTVKIGVLQPLEEIFLHSFAYPYGLVSGDYNKLSAFIEKEGKEVLQRGQTEFGLSREEAIHNLFFILGFNAFGGFSVFLPTLLSTLASDKTGLQQKLVKEVREKAGSTLSFDSIKQLELVNSVVYETLRLNPPVPLQFARARKDFQLSTYDSAFDIKKGELLCGYQPLVMKDPKVFDEPETFKPDRFMEDKGAELLNYLYWSNGPQTNTPTVSNKQCAGKDYVVMTASLFVAHLFQRYDSVMGDSSSITAFEKNN 493
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32186773 32190192 + Conep03aG0183200.1 Cone3ag1324 434783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1324 493 CDD CYP74 69 478 - -
Cone3ag1324 493 Pfam Cytochrome P450 319 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 SUPERFAMILY Cytochrome P450 35 480 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 MobiDBLite consensus disorder prediction 1 25 - -
Cone3ag1324 493 PRINTS E-class P450 group IV signature 355 371 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 PRINTS E-class P450 group IV signature 455 473 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 PRINTS E-class P450 group IV signature 392 406 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 PRINTS E-class P450 group IV signature 408 426 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 Gene3D Cytochrome P450 35 491 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone3ag1324 493 PANTHER CYTOCHROME P450 26 40 476 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Cone3ag1324 493 FunFam Allene oxide synthase, chloroplastic 35 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1126 Cone-Chr12:9073403 Cone3ag1324 Cone-Chr3:32186773 5.08E-121 dispersed
Cone17ag1313 Cone-Chr17:9317475 Cone3ag1324 Cone-Chr3:32186773 8.77E-130 dispersed
Cone20ag0160 Cone-Chr20:698999 Cone3ag1324 Cone-Chr3:32186773 1.94E-129 dispersed
Cone3ag1324 Cone-Chr3:32186773 Cone7ag1789 Cone-Chr7:11734720 6.00E-129 dispersed
Cone10ag1274 Cone-Chr10:9785795 Cone3ag1324 Cone-Chr3:32186773 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1324 K10528 - mdm:103427164 739.569