Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag1328 | ATGGATGTGGCTGATCAATTTATTCCGACCATCTCTCCTCCACCACTTGTGTCGGAGGCCACTACTACTATACACTGCCCTGTCACTCTCAAATCTACCAGATGTGATTCTCACGATCACGAACACGATCTTCACGGCTCTGCTCCAGCGTCCGATGAAAGTGATACTAATAATAATAATCGTGATGATCGGATGGTTGTCAACGAAATGAACTTTTTTGCTGATAATAACAAAGACTCTAGAACTGATCATGCTGGAGATATCAGAAAGGAATTAGATCATGTGATGGGTGCTTCTAAGTTCCAGTACTTGAATGTAAATACTGGTTTGAATCTTCTTACCACAAACTATAGTATCGACAAGTCTATCGTGGATGACATAGGGATGTCTCCTAATGTAGAGCCCAGGCGAGACACAGACGAGCTTCCTGTTCTTCAAGCTGAGCTTGAGCAAATGAACATGGAGAACCGGCGTTTAAAGGAAACTCTAAATAAAGTCACAAGCAATTATCAAGCTTTACGAATCGAATGGATGAATTTGATCATGCTCAACAGGAAGGCTGATCAAAACAACGATCAAGATGATAAAGAAGTAGAGGATCAAAATCCAGCAGTCAAGAAACAAATCATTACCACAAGCCACGTACTTGATGATAATAATAGTAATAATAATGGCCGGAAAATGGTGTCTAGAAATTTCATGGATCTCGGTTTGGCTACAAATGCAGATATTAATGATGATACTAATCAAGATCAGAAGTCGAATTCTTCATCTGAAGGGAGATCATTAGGGCCTCCCGATGATCATCGAGGGGTTGAGAAAAAGAAATTCGAAGGAATGGATATTAATCTAATTATATCATCACCAAGTAGGAGATCGAGAGAAGATAGCCCGGAACAAACCATGTTGACCGTTGGATTATCGGGTTGTACGAGTAATAATCATAAAATTAATAATGTTCAGAGATCGAGTGGTACTAGTGCTGCTGCTTCTTCTAAATATGTTGATCAAACTGAGGCAACCATGAGGAAGGCACGTGTCTCGGTTCGAGCTCGATCGGAGGCTCCTTCGATGACTGATGGGTGTCAATGGCGAAAGTATGGGCAGAAGATGGCTAAGGGAAATCCATGTCCACGAGCTTATTATCGTTGCACTATGGCTGCTGGCTGTCCTGTTCGAAAACAAGTGCAAAGGTGTGCAGAAGATAGAACAATCCTCATAACCACATACGAAGGCAACCATAACCATCCATTGCCACCAGCCGCCATGGCAATGGCCTCATCAACATCGTCTGCTGCACATATGCTCCTCTCCGGCTCAATGTTGAGCCCAGATGGCCTAATGAACTCAAATTTCTTAACAAGGACTCTCCTCCCATGCAGTTCAAGCATGGCCACTATTTCAGCCTCAGCTCCATTCCCCACAGTTACGCTAGATCTCACTCAAAACCCTAACCCTCTAGAGTCCCAAAGACCACCCCAGGACCAATTCCAAATCCCTTTCCCAACAAACCAACCTCAAAATATTACAAACTCTTCACCCTCTCAATTAATACCTCAAATCATGGGACAAGTCTTATATAACCAATCAAAATTCTCAGGCCTTCAGATGTCACAAGATCAACTGAACCATACAAGCGAATTCAGTGCAGCTTCTGCGGCTGTTATTGCATCCGACCCTAATTTTACAGCAGCTCTAGCGGCAGCCATTAGTTCTATTATTGGGGGTGCTCATCAAGACAACAACAATGTTTGTGACAATAATGGAAACGTTCATTCTTCTAATAAATATAGTAACGGGAACAATTCTACTAGCAACTACAATAGTTATATGGGCAATTAG | 1842 | 42.24 | MDVADQFIPTISPPPLVSEATTTIHCPVTLKSTRCDSHDHEHDLHGSAPASDESDTNNNNRDDRMVVNEMNFFADNNKDSRTDHAGDIRKELDHVMGASKFQYLNVNTGLNLLTTNYSIDKSIVDDIGMSPNVEPRRDTDELPVLQAELEQMNMENRRLKETLNKVTSNYQALRIEWMNLIMLNRKADQNNDQDDKEVEDQNPAVKKQIITTSHVLDDNNSNNNGRKMVSRNFMDLGLATNADINDDTNQDQKSNSSSEGRSLGPPDDHRGVEKKKFEGMDINLIISSPSRRSREDSPEQTMLTVGLSGCTSNNHKINNVQRSSGTSAAASSKYVDQTEATMRKARVSVRARSEAPSMTDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMASSTSSAAHMLLSGSMLSPDGLMNSNFLTRTLLPCSSSMATISASAPFPTVTLDLTQNPNPLESQRPPQDQFQIPFPTNQPQNITNSSPSQLIPQIMGQVLYNQSKFSGLQMSQDQLNHTSEFSAASAAVIASDPNFTAALAAAISSIIGGAHQDNNNVCDNNGNVHSSNKYSNGNNSTSNYNSYMGN | 613 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 32232091 | 32235165 | + | Conep03aG0183600.1 | Cone3ag1328 | 434787 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 482 | 513 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 35 | 49 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 242 | 262 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 585 | 613 | - | - | |
Cone3ag1328 | 613 | SMART | WRKY_cls | 358 | 418 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 35 | 62 | - | - | |
Cone3ag1328 | 613 | FunFam | probable WRKY transcription factor 31 | 343 | 420 | - | - | |
Cone3ag1328 | 613 | Pfam | WRKY DNA -binding domain | 360 | 417 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag1328 | 613 | SUPERFAMILY | WRKY DNA-binding domain | 352 | 419 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 205 | 228 | - | - | |
Cone3ag1328 | 613 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 132 | 581 | IPR044810 | GO:0003700(InterPro) | |
Cone3ag1328 | 613 | Gene3D | WRKY domain | 343 | 420 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 241 | 333 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 263 | 280 | - | - | |
Cone3ag1328 | 613 | ProSiteProfiles | WRKY domain profile. | 353 | 419 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone3ag1328 | 613 | Coils | Coil | 142 | 176 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 190 | 228 | - | - | |
Cone3ag1328 | 613 | MobiDBLite | consensus disorder prediction | 299 | 333 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag0085 | Cone-Chr19:498410 | Cone3ag1328 | Cone-Chr3:32232091 | 1.06E-48 | dispersed | |
Cone3ag1328 | Cone-Chr3:32232091 | Cone3ag0455 | Cone-Chr3:2192890 | 2.53E-21 | dispersed | |
Cone3ag0945 | Cone-Chr3:4905876 | Cone3ag1328 | Cone-Chr3:32232091 | 4.02E-42 | transposed | |
Cone1ag0014 | Cone-Chr1:120101 | Cone3ag1328 | Cone-Chr3:32232091 | 1.23E-112 | wgd | |
Cone12ag1367 | Cone-Chr12:10158602 | Cone3ag1328 | Cone-Chr3:32232091 | 1.41E-112 | wgd | |
Cone3ag1328 | Cone-Chr3:32232091 | Cone5ag1852 | Cone-Chr5:12997959 | 1.30E-96 | wgd | |
Cone3ag1328 | Cone-Chr3:32232091 | Cone8ag1424 | Cone-Chr8:11102295 | 1.59E-112 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45856 | PF00107 | ADH_zinc_N | 3.90E-18 | CL0063 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag1328 | - | - | - | 0.0 |