Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1335 ATGTTGACGGATGGAAAAATTGTTGCCGTTAAAAAATCAAAACTAATCGACACGTCTCATGTTTCACATTTCATCAATGAGGTGATAATTGTATCACAAATTAATCACAGAAATATTGTCAAAGTAATTGGGTGTTGTTTGGAGACTGAAGTTCCTTTGTTGGTTTACGAATTCATTCCAAATGGAACCCTCTTCCAACTCATACATGACAAAAGTCAGGAGTTCATCACATTTACATGGGATATGCGCTTGAGAATTGCCGCAGAAATTGCAAATGCTCTTTCATATCTTCATTCAGCTGCCTCTGCTCCCATTTATCATCGAGATATCAAGTCTACAAACATACTTTTGGATGAAAAATACAGAGCAAAAGTCTCAGATTTTGGAATATCGAGATCAATTTCTATTGACGAAACTCACTTGACGACCATTGTTGAAGGAACTTTCGGCTACCTAGACCCTGAGTTTTTCCAATCAAGTCAATTCACAGAGAAAAGTGATGTATATAGTTTTGGAGTCGTTCTTGCTGAGCTCTTAACCGCAAAAAAGCCAATCAACCAATCTGTAGAATGTAGAAGCTTAGCAACCTTTTTTCTACTTTCAATGGAAGAAAATCGTCTCTTCGAAATTCTTGATTCACAAGTTATAATGGGAAGGGAAGATGAGATCATAGTAGTTGCCCAACTTGCTGAGAAATGCTTAAACATGAATGGGAGAAATAGACCTACAATGAAAGAAGTTGCCAAGAAGTTAGAAGGGATTAGAATGTCACTAGAAGCTTCTTTTGTTGAGCGGAATCCTGATGAGGCTGATTCTGGTTTTGATGACATATTAATTGGGCAATGGGACCCTTCATCTTCGAGTTACACGTCATGCTTCAACAGTGGCCTAGCTCAACCCATTGATGAGGTATCTCTAATTCTTGCGACCCAATGA 936 38.14 MLTDGKIVAVKKSKLIDTSHVSHFINEVIIVSQINHRNIVKVIGCCLETEVPLLVYEFIPNGTLFQLIHDKSQEFITFTWDMRLRIAAEIANALSYLHSAASAPIYHRDIKSTNILLDEKYRAKVSDFGISRSISIDETHLTTIVEGTFGYLDPEFFQSSQFTEKSDVYSFGVVLAELLTAKKPINQSVECRSLATFFLLSMEENRLFEILDSQVIMGREDEIIVVAQLAEKCLNMNGRNRPTMKEVAKKLEGIRMSLEASFVERNPDEADSGFDDILIGQWDPSSSSYTSCFNSGLAQPIDEVSLILATQ 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 32314200 32315135 + Conep03aG0184300.1 Cone3ag1335 434794
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1335 311 FunFam Wall-associated receptor kinase-like 10 1 58 - -
Cone3ag1335 311 PIRSF ILK 4 263 - -
Cone3ag1335 311 Pfam Protein kinase domain 3 249 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1335 311 SUPERFAMILY Protein kinase-like (PK-like) 4 252 IPR011009 -
Cone3ag1335 311 Gene3D Transferase(Phosphotransferase) domain 1 59 275 - -
Cone3ag1335 311 FunFam Wall-associated receptor kinase 2 59 273 - -
Cone3ag1335 311 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone3ag1335 311 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1335 311 SMART serkin_6 1 254 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1335 311 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 264 IPR045274 GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)|GO:0007166(PANTHER)|GO:0007166(InterPro)
Cone3ag1335 311 Gene3D Phosphorylase Kinase; domain 1 1 58 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1335 Cone-Chr3:32314200 Cone7ag1498 Cone-Chr7:10473344 5.92E-98 dispersed
Cone3ag1335 Cone-Chr3:32314200 Cone10ag1382 Cone-Chr10:10765041 2.53E-133 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82704 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1335 - - - 0.0