Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone3ag1342 | ATGGCACACATTGCTAATGGCAGAGACACAGGCAATTGTGTCTCTTTGTTGCGGAGTGCAAATTCAAGCCAGAGCAACATGCTAATCTTACAAGAGAGTTGCACAGACCAAACAGGCTCTTACGTAATCTACGCTCCCGTCGATATAGTCGCGATGAACGTTGTCTTGAACGGAGGGGACCCAGATTACGTGGCACTACTCCCATCAGGATTCGCTATCCTACCTGATGGAACTAGTTGTTCTTCATCCAACGGTCATCATCAAATCAGTGCAGGATCGTCATCGTCATCTGCACCGTCATCTCCTGGTGGTTCCCTCTTGACCGTTGCTTTCCAGATTCTGGTTGATTCAGTTCCAACCGCTAAGCTGAATCTTGGCTCAGTTGCTACTGTGAACAATCTCATTGCCTGCACTGTTCAAAGGATCAAAGCTGCTTTATCATGCGACAATGCATGA | 456 | 47.37 | MAHIANGRDTGNCVSLLRSANSSQSNMLILQESCTDQTGSYVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTSCSSSNGHHQISAGSSSSSAPSSPGGSLLTVAFQILVDSVPTAKLNLGSVATVNNLIACTVQRIKAALSCDNA | 151 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 3 | 32391730 | 32392278 | - | Conep03aG0185000.1 | Cone3ag1342 | 434801 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone3ag1342 | 151 | SUPERFAMILY | Bet v1-like | 4 | 143 | - | - | |
| Cone3ag1342 | 151 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 | 1 | 148 | IPR042160 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone3ag1342 | Cone-Chr3:32391730 | Cone8ag0486 | Cone-Chr8:3377935 | 3.46E-30 | dispersed | |
| Cone3ag1342 | Cone-Chr3:32391730 | Cone3ag1343 | Cone-Chr3:32393603 | 6.62E-88 | tandem | |
| Cone10ag1284 | Cone-Chr10:9902693 | Cone3ag1342 | Cone-Chr3:32391730 | 2.47E-74 | wgd | |
| Cone12ag1384 | Cone-Chr12:10229796 | Cone3ag1342 | Cone-Chr3:32391730 | 9.30E-66 | wgd | |
| Cone3ag1342 | Cone-Chr3:32391730 | Cone8ag1442 | Cone-Chr8:11179665 | 4.95E-67 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone3ag1342 | K09338 | - | rcu:8274823 | 227.254 |