Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag1375 | ATGGAGTTCGATCTTGAAAACCCATTAACCCACTTCCACCACCTTCACTCCGACTTCTTCCCTTCACTCTTCCTCATCGAATCCGATCACATGCCCTCTCAAAATTACTTTCTTACCCTCCAATCCTCCCATTCCAAGCTCTCTTTCCGGCAAGAAACCATCTCTTTGATCTTACAGTGTTGCGGTAATTTTGACCCCCTTTTGTCTTACCTTGCCATAAATTACCTCGATCGGTTCCTATCTTCTCAAGGAGTTCCGCAATCAAAACCATGGGTCGTAAGGCTTGTTGCAATCTCATGTGTTTCTCTTGCTGCCAAAATGAAACAAACAGATCGCTTTTTTATCTCTGGTTTTCAGAGTGATGGGGGGTTTATATTCGACACACAGACAATACAGAGAATGGAAGTAGTGATTTTAGGAGCATTAGAATGGAGAATGAGATCGATCACTCCTTTCTCTTTCATCTCTTTTTTTATATCTTTCTTCAAGCTCAAAGACCCGCCATTAATGGAAGCTCTCAAAGCTAGAGCTATCGAAATCATCTACAACGCTCAAAATGACATAAAGCTGTTGGAATTTAAGCCATCAGTTGTATCTGCTTCGTCTCTTCTCTCTGCTTCTTGTGAACTCTTCCCTTTGCAATATCCTTGCTTCAGCAAAGCAATCTCCAGTTGTTCCTTTGTAGATACAGAAAGCATGTTGCTCTGCTTCAGTGCGATGCAGGACATAGTAATAAATGAGTACGTCTCTGTGTTTGATGTAAATCAAAGCTTGGTAACACCTGTCAATGTGCTAGACCTTCGTTTTTCGAGCTTCGAAAGTGAAAATATAGATGGTGGTGGTCACGTCAGCAACGAATCACAGAGCGTAGAGGATTGA | 879 | 41.87 | MEFDLENPLTHFHHLHSDFFPSLFLIESDHMPSQNYFLTLQSSHSKLSFRQETISLILQCCGNFDPLLSYLAINYLDRFLSSQGVPQSKPWVVRLVAISCVSLAAKMKQTDRFFISGFQSDGGFIFDTQTIQRMEVVILGALEWRMRSITPFSFISFFISFFKLKDPPLMEALKARAIEIIYNAQNDIKLLEFKPSVVSASSLLSASCELFPLQYPCFSKAISSCSFVDTESMLLCFSAMQDIVINEYVSVFDVNQSLVTPVNVLDLRFSSFESENIDGGGHVSNESQSVED | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 32742463 | 32744736 | - | Conep03aG0188800.1 | Cone3ag1375 | 434834 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag1375 | 292 | SMART | Cyclin_C_2 | 149 | 289 | IPR004367 | - | |
Cone3ag1375 | 292 | FunFam | D6-type cyclin | 145 | 238 | - | - | |
Cone3ag1375 | 292 | Pfam | Cyclin, C-terminal domain | 149 | 246 | IPR004367 | - | |
Cone3ag1375 | 292 | Pfam | Cyclin, N-terminal domain | 24 | 147 | IPR006671 | - | |
Cone3ag1375 | 292 | SMART | cyclin_7 | 55 | 140 | IPR013763 | - | |
Cone3ag1375 | 292 | SUPERFAMILY | Cyclin-like | 130 | 245 | IPR036915 | - | |
Cone3ag1375 | 292 | Gene3D | - | 33 | 147 | - | - | |
Cone3ag1375 | 292 | Gene3D | - | 23 | 238 | - | - | |
Cone3ag1375 | 292 | PANTHER | CYCLINS | 25 | 242 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone3ag1375 | 292 | SUPERFAMILY | Cyclin-like | 9 | 146 | IPR036915 | - | |
Cone3ag1375 | 292 | FunFam | D6-type cyclin | 33 | 144 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone3ag1375 | Cone-Chr3:32742463 | Cone4ag1308 | Cone-Chr4:10767744 | 2.13E-39 | dispersed | |
Cone10ag1311 | Cone-Chr10:10248588 | Cone3ag1375 | Cone-Chr3:32742463 | 2.97E-168 | wgd | |
Cone14ag1098 | Cone-Chr14:9171459 | Cone3ag1375 | Cone-Chr3:32742463 | 2.24E-19 | wgd | |
Cone3ag1375 | Cone-Chr3:32742463 | Cone8ag1477 | Cone-Chr8:11289833 | 2.76E-91 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag1375 | K18812 | - | rcu:8287587 | 312.383 |