Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1433 ATGATTTCAAGATCATACACGAATCTACTAGATTTGGCTTCAGGAAAATTTCTGGCAGTGGAAGTGAAGAGGAAGCGATTTCCGAGGGTAATGACCGTTCCAGGGGTTTTAGCAGAGTTTGATGATGAGCAGGCATATAGTGTGACTTCTGAAAACCCATCCTCTATTTCTTCAGAACGGATGATTATCGTAGCGAATCAGCTTCCTTTGAAAGCAAAGCGAAAAGAGGACAATAAAGGTTGGAGTTTCAGTTGGAATGAGGATTCTTTACTCTTACAGCTTAAAGATGGTCTTCCTGAAGATCTAGATGTTATTTATGTCGGATCACTAAAGGTCGATGTTCATCCTGATGACCATGAAGATGTATCACAGGTTTTGCTCGAGAAATTTAAATGCGTTCCTACATTTCTTCCATCTGATGTCTTGGAAAAGTTTTATGACGGTTTCTGCAAGAAGCACCTGTGGCGTCTTTTCCACTATATGATGCCGTACAATTCCGATCAAAGATTTGATCGTTCACTCTGGGAAGCATATGTTTTAGCTAATAAGTTGTTTTTCGAAAGAGTGGTTGAAGTTATAAACCCAGATGATGATTATATTTGGATTCATGATTACCATTTAATGGTGCTTCCAACTTTCTTAAGAAGACGGTTTAACCGGCTTAGAATGGGATTTTTTCTTCACAGCCCGTTTCCTTCTTCTGAGATTTACCGAACTCTTCCTGTCAGAGAAGAAATACTTAGGGCCTTATTGAACTCTGATATTATTGGATTCCATACCTTTGATTATGCTCGCCATTTTCTCTCTTGTTGTAGTAGAATGTTGGGGTTGGAATATCAATCAAAGAGGGGATATCTTGGGTTGGAATATTATGGAAGGACAATTGGGATAAAGATTATGCCAGTCGGGATTCATATGGGTCGGATTGAGTCCATTATGAAAGCAGCAGAAGAGGAGTCTTGGGCTAGTGAAGTTAAAAATCAGTTTTCTGGGAAGACAGTGTTGCTTGGAGTTGATGATATGGACATTTTCAAAGGTATAGATTTGAAGCTCTTGGCAATGGAACAGATGCTTAAGGAACATCCTGAATGGCAAGGAAAAGCTGTGCTAGTCCAGATTGTAAACCCGGCAAGAGGCAGAGGGGAAGATTTAAAAGGAATGGAGGATAACATAAGACAAATTTCTCATAAGATCAATACAAAATACCGGAAACCTGGCTATGAGCCAATAATTCTAATTGATGGGCCGGTTTCAATCTCTGAAGCAGTTTCATATTTCAGCATTGCAGAGTGTGTTGTAGTGACAGCTGTTAGGGACGGGATGAACCTTACTCCTTATGAATATATTGCCATAAGACAAGGGGTGTCTGGTTCTGAATCTTGTTCTAATTCCAATAGCTTAAAGAAGAGCATGTTAGTGGTGTCAGAATTTATTGGATGTTCTCCGTCCCTTAGTGGAGCGATTCGAGTCAACCCATGGAATGTTGAAACAACTGCTGAGGCCATGAATGAAGCGATTTCAATGTCCGATACTGAAAAACAGTTAAGGCATGAGAAACATTATCGTTATGTAAGCACACATGATGTGGCTTATTGGTCACATAGTTTCTTACAAGACATGGAGAGGGCATGTTTGGACCATTTTAGAAGAAGATGTTGGGGTATTGGTTTTAGCTTTGGGTTTAGAGTTGTGGCTCTTGATCCTAGCTTCCGGAAGCTTTCAATAGACAAGATTGTATCAGCTTATGGCCAGGCAAAGAGTCGGGCTATTCTTTTGGACTATGATGGTACAGTGATGCCCCAAAATTCCATCAACAAGTCTCCAAGTCAACGTGTTATCTCCATCCTCAACACACTTTGTGCAGATGTGAAAAATTTAGTTTTCATTGTTAGTGGAAGAAGCAGGGACAGCTTAGGCAAGTGGTTTTGCCCTTGCACAAAGCTTGGAATTGCAGCCGAACATGGATACTTCTTGAGGTGGGCCCAAAATGATAAATGGGAAACTTGTGGTCAGAGCACTGAATTCGGATGGATGCAAATTGCTGAACCTGTCATGAATTTGTATACTGAGGCGACTGATGGTTCTTCCATTGAAAGAAAGGAAAGTGCATTGGTATGGCAATATAGAGATGCTGACTCGGGATTCGGATCTTTCCAGGCAAAGGAGATGTTAGATCATCTTGAGAGTGTTTTAGCAAACGAACCTGTTGCTGTTAAGAGTGGCCAATTTATTGTAGAGGTTAAACCTCAGGGAGTAAGCAAGGGGCTGGTTGCAGAAAAGATCTTTACTTCAATGTCAGAGAATGGGAAACAAGCCGACTTTGTATTATGTATTGGTGATGACAGATCAGATGAGGATATGTTTGAAGTAATAGGCGATTCAATGTCCAGGAATATTCTTTCTTCCAGCACCTCCGTTTTTGCTTGCACGGTTGGACAAAAACCGAGCAGAGCCAAATACTATTTAGACGACACAACTGAAGTAATAAGCATGCTTGAATCCCTAGCCGAGGCCTCTAGTACTTCACCATTATCGTCTGAAAACAAAGCTGATGATAGCTCTCCTTGA 2568 40.81 MISRSYTNLLDLASGKFLAVEVKRKRFPRVMTVPGVLAEFDDEQAYSVTSENPSSISSERMIIVANQLPLKAKRKEDNKGWSFSWNEDSLLLQLKDGLPEDLDVIYVGSLKVDVHPDDHEDVSQVLLEKFKCVPTFLPSDVLEKFYDGFCKKHLWRLFHYMMPYNSDQRFDRSLWEAYVLANKLFFERVVEVINPDDDYIWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILRALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTIGIKIMPVGIHMGRIESIMKAAEEESWASEVKNQFSGKTVLLGVDDMDIFKGIDLKLLAMEQMLKEHPEWQGKAVLVQIVNPARGRGEDLKGMEDNIRQISHKINTKYRKPGYEPIILIDGPVSISEAVSYFSIAECVVVTAVRDGMNLTPYEYIAIRQGVSGSESCSNSNSLKKSMLVVSEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMSDTEKQLRHEKHYRYVSTHDVAYWSHSFLQDMERACLDHFRRRCWGIGFSFGFRVVALDPSFRKLSIDKIVSAYGQAKSRAILLDYDGTVMPQNSINKSPSQRVISILNTLCADVKNLVFIVSGRSRDSLGKWFCPCTKLGIAAEHGYFLRWAQNDKWETCGQSTEFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADSGFGSFQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGLVAEKIFTSMSENGKQADFVLCIGDDRSDEDMFEVIGDSMSRNILSSSTSVFACTVGQKPSRAKYYLDDTTEVISMLESLAEASSTSPLSSENKADDSSP 855
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33088889 33093608 - Conep03aG0195100.1 Cone3ag1433 434892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1433 855 MobiDBLite consensus disorder prediction 836 855 - -
Cone3ag1433 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 587 704 - -
Cone3ag1433 855 Gene3D Glycogen Phosphorylase B; 312 525 - -
Cone3ag1433 855 NCBIfam HAD-IIB family hydrolase 590 794 IPR006379 -
Cone3ag1433 855 Gene3D Glycogen Phosphorylase B; 53 311 - -
Cone3ag1433 855 Gene3D - 707 850 IPR023214 -
Cone3ag1433 855 Gene3D - 587 689 IPR023214 -
Cone3ag1433 855 SUPERFAMILY HAD-like 588 836 IPR036412 -
Cone3ag1433 855 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 717 849 - -
Cone3ag1433 855 CDD GT20_TPS 60 541 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone3ag1433 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 544 - -
Cone3ag1433 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 24 838 IPR001830 GO:0003824(InterPro)|GO:0004805(PANTHER)|GO:0005829(PANTHER)|GO:0005992(PANTHER)|GO:0005992(InterPro)|GO:0070413(PANTHER)
Cone3ag1433 855 FunFam Trehalose-6-phosphate synthase 2 671 750 - -
Cone3ag1433 855 CDD HAD_TPP 589 828 - -
Cone3ag1433 855 NCBIfam trehalose-phosphatase 585 836 IPR003337 GO:0005992(InterPro)
Cone3ag1433 855 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 310 - -
Cone3ag1433 855 FunFam Alpha,alpha-trehalose-phosphate synthase 312 525 - -
Cone3ag1433 855 Pfam Glycosyltransferase family 20 60 541 IPR001830 GO:0003824(InterPro)|GO:0005992(InterPro)
Cone3ag1433 855 Pfam Trehalose-phosphatase 591 825 IPR003337 GO:0005992(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0222 Cone-Chr1:1385340 Cone3ag1433 Cone-Chr3:33088889 0 dispersed
Cone3ag1433 Cone-Chr3:33088889 Cone5ag1644 Cone-Chr5:11621706 0 dispersed
Cone10ag1362 Cone-Chr10:10609845 Cone3ag1433 Cone-Chr3:33088889 0 wgd
Cone3ag1433 Cone-Chr3:33088889 Cone6ag0210 Cone-Chr6:992992 2.38E-125 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1433 K16055 - csv:101209914 1426.38