Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1440 ATGGCTTCCTCCGCTAAAGATCGCGAGAGCTTTGTCTATATTGCCAAGCTTGCCGAGCAGGCCGAGCGTTATGACGAGATGGTTGAGGCAATGAAGAATATTGCTAAACTTGACGTTGAGCTGACAATCGAAGAGCGAAACTTGCTCTCTGTTGGGTATAAGAATATTGTTGGAGCCCGAAGAGCTTCATGGAGGATCCTGTCATCAATAGAGCAGAAGGAGGAATCAAAAGGGAATGATCTGAATGCGAAAAGGATCAAGGAATATAGACACAAGGTTGAAACAGAGCTGTCAACCATTTGTGATGATATCATGACAGTCATAAATGAGCATCTAATCCCTTCAGCTACAGCTGGTGAATCAACAGTGTTCTACTATAAGATGAAGGGTGATTATTATCGGTACCTTGCAGAATTTAAGTCGGGTAATGAGAAGAAAGAGGCTGCTGATCAATCAATGAAGGCTTATGAGGCTGCAACCAGCACAGCAGAAACTGACTTACCCCCTACACATCCTATCCGATTGGGTTTGGCTCTTAATTTCTCTGTCTTCTATTATGAGATCCTGAACTCACCCGAAAGGGCCTGCCACCTTGCTAAAGAAGCTTTTGATGAAGCCATCTCAGAACTTGACTCTCTCAATGAGGAGTCATACAAAGATAGCACCTTAATTATGCAGCTGCTTAGGGATAATCTTACCTTGTGGACGTCTGACATCCCAGAGGATGGAGATGCTCAGAAGTTAAATGGTGCTTCCAAGATTGTTGGGGCAGAAGAGGCAGAGTGA 786 44.15 MASSAKDRESFVYIAKLAEQAERYDEMVEAMKNIAKLDVELTIEERNLLSVGYKNIVGARRASWRILSSIEQKEESKGNDLNAKRIKEYRHKVETELSTICDDIMTVINEHLIPSATAGESTVFYYKMKGDYYRYLAEFKSGNEKKEAADQSMKAYEAATSTAETDLPPTHPIRLGLALNFSVFYYEILNSPERACHLAKEAFDEAISELDSLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGDAQKLNGASKIVGAEEAE 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33138335 33141435 + Conep03aG0195800.1 Cone3ag1440 434899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1440 261 PANTHER 14-3-3 PROTEIN 7 241 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Cone3ag1440 261 SMART 1433_4 8 249 IPR023410 -
Cone3ag1440 261 FunFam 14-3-3 protein epsilon 3 249 - -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Cone3ag1440 261 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Cone3ag1440 261 Coils Coil 14 34 - -
Cone3ag1440 261 Gene3D - 1 250 IPR036815 -
Cone3ag1440 261 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Cone3ag1440 261 Pfam 14-3-3 protein 15 236 IPR023410 -
Cone3ag1440 261 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Cone3ag1440 261 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
Cone3ag1440 261 Coils Coil 196 216 - -
Cone3ag1440 261 PIRSF 14-3-3 2 248 IPR000308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0905 Cone-Chr19:7049179 Cone3ag1440 Cone-Chr3:33138335 5.82E-124 dispersed
Cone3ag1440 Cone-Chr3:33138335 Cone4ag1325 Cone-Chr4:10869838 5.29E-115 dispersed
Cone10ag1369 Cone-Chr10:10676164 Cone3ag1440 Cone-Chr3:33138335 1.10E-181 wgd
Cone12ag1494 Cone-Chr12:10639339 Cone3ag1440 Cone-Chr3:33138335 4.41E-156 wgd
Cone3ag1440 Cone-Chr3:33138335 Cone8ag1540 Cone-Chr8:11568544 5.37E-157 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1440 K06630 - gmx:100801348 458.759