Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone3ag1487 | ATGTCGTCTGGCTCTTTGAATGAAGAATTATCGAAGAAGACTTTGGTTTTAGGCTTGTCCCTATGGGTATTGATCTGCATATGCTTTGCTGCATTTATAGTCTTGATTCTTTGTTTATTATCCATATGGGTCATGTCCCGACGAAAATCTAAAAGATCCATTGACGGATATCCCCTCTCTCAAATCCCGATCATATCCAAGGACATAAAAGTTGACCGGGTAGGGACTCAAGCTAACCGAGATCATCCTGAAAGCTTATTTCTTTCAGTCCTTGATAAATCAGGTGATAAGAATTCAGACAAGATGTATGCTCATTTGGGTATGAGCAAATCAAGTGATCCGGACAATATGAGTCAATGTAGCTCGGTTTATCAAATAGAGAGGGGCGGCAGTTCACATTCGGGCGAAGAAGGAAGCTCCGGAACGGGACGGAAGCAATCTACATTGTCATATGGAGGAGGGCATGGAGGGCTTGTGACGGCTTCTCCTCTAGTTGGTTTGCCGGAATTTTCACATCTTGGGTGGGGCCATTGGTTCACACTTAGGGATTTGGAATTTGCGACGAGCCGCTTCGCCGCAGAGAATGTGCTTGGTGAGGGGGGGTATGGAGTTGTTTACAAGGGAAGACTTATTAATGGCACTGAAGTGGCAGTGAAGAAACTACTTAATAATTTGGGACAGGCGGAGAAAGAATTTCGAGTTGAAGTTGAGGCCATTGGTCATGTTCGACATAAGAATCTCGTTCGGCTTCTGGGTTATTGCATAGAAGGAGTTCATAGGATGCTAGTTTATGAATATGTGAACAATGGAAACTTGGAACAATGGTTACACGGAGCTATGCGCCAACACGGAACCCTTACATGGGAGGCCCGCACAAAGGTGCTTCTTGGCACTGCTAAAGCGCTAGCATATTTACACGAAGCAATAGAGCCGAAAGTGGTTCATAGAGACATAAAGTCAAGTAACATCTTGATTGATGATGAGTTTAATGCCAAGGTTTCTGATTTTGGATTGGCCAAACTCTTGGACTCGGGTGAAAGTCATATCACAACTAGAGTGATGGGAACATTTGGTTACGTGGCACCCGAATATGCAAATACGGGTTTGTTAAATGAGAGGAGCGACATTTACAGCTTTGGTGTTCTCCTTCTAGAAGCAATTACGGGAAGAGACCCTGTGGACTATGGCCGACCGGCTAATGAGGTTAATCTTGTGGAGTGGCTTAAGGTGATGGTGGGGACGGGAAGAGCTGAGGAAGTTATGGACCCGGAAGTTGAAGTTAAACCGACTACACGGGCTTTAAAACGAGCCCTTCTAGTTGCACTTAAGTGCATTGATCCCGAAGCAGGCAAGAGACCTAAAATGAGTCAAGTTGTTAGAATGCTTGAAGCCGATGAATATCCCGCACGTGAGGATCGAAGAAATAGAAAGAGCCGAACAGTGAGCATGGAAATGGAAGTGATGAAGGAAATTTCGGGTTCGGAGGATATAGAAAGCAAGCCAGGAGAAGGGGAGTCAGAGATTCATACTTCTGAGACAACTCATTGA | 1548 | 44.83 | MSSGSLNEELSKKTLVLGLSLWVLICICFAAFIVLILCLLSIWVMSRRKSKRSIDGYPLSQIPIISKDIKVDRVGTQANRDHPESLFLSVLDKSGDKNSDKMYAHLGMSKSSDPDNMSQCSSVYQIERGGSSHSGEEGSSGTGRKQSTLSYGGGHGGLVTASPLVGLPEFSHLGWGHWFTLRDLEFATSRFAAENVLGEGGYGVVYKGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARTKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNERSDIYSFGVLLLEAITGRDPVDYGRPANEVNLVEWLKVMVGTGRAEEVMDPEVEVKPTTRALKRALLVALKCIDPEAGKRPKMSQVVRMLEADEYPAREDRRNRKSRTVSMEMEVMKEISGSEDIESKPGEGESEIHTSETTH | 515 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
3 | 33526021 | 33529943 | + | Conep03aG0200500.1 | Cone3ag1487 | 434946 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone3ag1487 | 515 | ProSitePatterns | Protein kinases ATP-binding region signature. | 197 | 220 | IPR017441 | GO:0005524(InterPro) | |
Cone3ag1487 | 515 | SMART | serkin_6 | 191 | 462 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag1487 | 515 | CDD | STKc_IRAK | 197 | 463 | - | - | |
Cone3ag1487 | 515 | SUPERFAMILY | Protein kinase-like (PK-like) | 175 | 465 | IPR011009 | - | |
Cone3ag1487 | 515 | Coils | Coil | 211 | 231 | - | - | |
Cone3ag1487 | 515 | Pfam | Protein kinase domain | 193 | 460 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag1487 | 515 | MobiDBLite | consensus disorder prediction | 468 | 515 | - | - | |
Cone3ag1487 | 515 | FunFam | Putative receptor-like protein kinase | 173 | 266 | - | - | |
Cone3ag1487 | 515 | MobiDBLite | consensus disorder prediction | 128 | 151 | - | - | |
Cone3ag1487 | 515 | ProSiteProfiles | Protein kinase domain profile. | 191 | 468 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone3ag1487 | 515 | PANTHER | OS01G0323000 PROTEIN | 4 | 494 | IPR052232 | - | |
Cone3ag1487 | 515 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 313 | 325 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone3ag1487 | 515 | MobiDBLite | consensus disorder prediction | 128 | 149 | - | - | |
Cone3ag1487 | 515 | Gene3D | Transferase(Phosphotransferase) domain 1 | 267 | 481 | - | - | |
Cone3ag1487 | 515 | Gene3D | Phosphorylase Kinase; domain 1 | 173 | 266 | - | - | |
Cone3ag1487 | 515 | FunFam | Putative receptor-like serine/threonine-protein kinase | 267 | 477 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone10ag0838 | Cone-Chr10:4250465 | Cone3ag1487 | Cone-Chr3:33526021 | 2.03E-207 | dispersed | |
Cone10ag1425 | Cone-Chr10:11022006 | Cone3ag1487 | Cone-Chr3:33526021 | 7.36E-179 | dispersed | |
Cone1ag1578 | Cone-Chr1:57478311 | Cone3ag1487 | Cone-Chr3:33526021 | 2.26E-224 | dispersed | |
Cone3ag1487 | Cone-Chr3:33526021 | Cone5ag0098 | Cone-Chr5:454772 | 3.67E-228 | dispersed | |
Cone3ag1487 | Cone-Chr3:33526021 | Cone6ag0157 | Cone-Chr6:780724 | 3.83E-75 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82712 | PF15805 | SCNM1_acidic | 4.40E-14 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone3ag1487 | - | - | - | 0.0 |