Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1489 ATGGCCGATGAACCTCTTATACCAAGAAGAACAGCACGCGAGGTAGAAGACGATCTAATCAGACCATCTTCGAGAAGAGACCTGTTAGCTTTTTCTTCAATCAATCTTGATCATGGCTACAATCATGGCCGTTCATGGCGTCAATCAACGGCTCATCTTCTCACAGCTGATTCCATCATGCCAATTTTAGCCTCAACCCCAAGACCTTCTTATATAAACCTCTTAGCCAATTTAAACCGGACCCGAAAAATACTGATACCTCGTCGTTCAAATTCCGCTCCGGCCCTTTTCACTGATTTTAAAATCTCCCTCCAAAAAGATCCCTTAGACCCAAGGCCCCAGCCCAAATCAAAACGTTTGATTGTATGGCAAGCCTCTATAGGTATGACCCTTTATGCCATAGTAGGCATTGTTATCTTTTGCACGGTAGGAAGTTTCACGGGAGAATCGACTTATAAAGTCATAGACGCCTTGTATTTCATAGTGGTTAGTCTTTGTACGAGTGGGTACGGAGATATCGTTCCGGACTCTGATTTTAGCAAACTCTTCACGTGTATATACATTCTGGTCGGGTTTGGATTTATCGATATTTTGCTAGACGGGTTAGTTTCTTACATCTGTGATAGGCAAGAGGAGGTTTTATTGAGCACGGTGGATGCGTACCGGTTTGATACGATGCTTAAAACGTATATAGTTGATAGGGAGAAGGGGAGGATGAGGATAAGGACTAAGGTGGTTTTGGCCTTAGGCATTGTGATTTTCTGCATTACTATAGGCGCGTTTGGGGCGCATTTTTTGGAGAGTTTGAGTTGGGTTGATAGTGTGTATCTATCTGTTATTTCCGTTACGACGGTTGGTTATGGCGATTATTCCTTTACAACTGTAAAGGGGAGATGTTTCGCGGTTGTTTGGTTATTAGTTAGCACGTTGGCTGTGGCGAGGGCGTTCTTGTACTTGGCCGAGTTGAGGATCCATAAGAGAAACCGAATGGTTGCGAAATGGGTTTTGCAGAAGAAGATAAATTTAGGGGATTTAATTGCTGCTGATCTTGATAACGATGGCTCCATAAGTAAATCTGAATTTTTGATATACAAGCTGAAGGAGATGGGAAAAATAGCAGAGAAAGATATTGTGCAGATAGGGAAACAGTTTGATTTGCTTGATAGTACTAATAGTGGAAAGATCACATTAGCTGATCTCATGGACTGGGGATGA 1215 42.39 MADEPLIPRRTAREVEDDLIRPSSRRDLLAFSSINLDHGYNHGRSWRQSTAHLLTADSIMPILASTPRPSYINLLANLNRTRKILIPRRSNSAPALFTDFKISLQKDPLDPRPQPKSKRLIVWQASIGMTLYAIVGIVIFCTVGSFTGESTYKVIDALYFIVVSLCTSGYGDIVPDSDFSKLFTCIYILVGFGFIDILLDGLVSYICDRQEEVLLSTVDAYRFDTMLKTYIVDREKGRMRIRTKVVLALGIVIFCITIGAFGAHFLESLSWVDSVYLSVISVTTVGYGDYSFTTVKGRCFAVVWLLVSTLAVARAFLYLAELRIHKRNRMVAKWVLQKKINLGDLIAADLDNDGSISKSEFLIYKLKEMGKIAEKDIVQIGKQFDLLDSTNSGKITLADLMDWG 404
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33540578 33542044 - Conep03aG0200700.1 Cone3ag1489 434948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1489 404 SUPERFAMILY Voltage-gated potassium channels 118 206 - -
Cone3ag1489 404 ProSitePatterns EF-hand calcium-binding domain. 349 361 IPR018247 -
Cone3ag1489 404 FunFam Two-pore potassium channel 2-like 223 347 - -
Cone3ag1489 404 PRINTS Two pore domain K+ channel signature 163 191 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone3ag1489 404 PRINTS Two pore domain K+ channel signature 283 292 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone3ag1489 404 Pfam EF hand 345 361 IPR002048 GO:0005509(InterPro)
Cone3ag1489 404 Gene3D - 345 403 - -
Cone3ag1489 404 SUPERFAMILY EF-hand 347 402 IPR011992 -
Cone3ag1489 404 Gene3D - 225 341 - -
Cone3ag1489 404 Gene3D - 114 220 - -
Cone3ag1489 404 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 152 352 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
Cone3ag1489 404 Pfam Ion channel 251 321 IPR013099 -
Cone3ag1489 404 Pfam Ion channel 134 205 IPR013099 -
Cone3ag1489 404 SUPERFAMILY Voltage-gated potassium channels 233 338 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag0247 Cone-Chr1:1641684 Cone3ag1489 Cone-Chr3:33540578 1.34E-81 dispersed
Cone3ag1489 Cone-Chr3:33540578 Cone5ag1609 Cone-Chr5:11296569 2.51E-100 dispersed
Cone3ag1489 Cone-Chr3:33540578 Cone10ag1423 Cone-Chr10:11013242 2.37E-257 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1489 K05389 - cit:102629027 498.819