Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone3ag1494 ATGCAGCAAGATCATCGCAGGAAGAGTTCAATAGAGGTGGACTTTTTCTCCGAATATGGCGATGCAAGTCGGTATAAAATCCTGGAAGTTATCGGAAAAGGAAGTTATGGAGTGGTTTGTTCAGCAATCGACACTCATACTGGTGAAAAAGTTGCAATAAAGAAGATTCATGGAATTTTCGAACATCTATCTGATGCAGCTCGCATTCTTCGTGAGATTAAGCTGCTCAGACTTCTTCGCCATCCAGACATTGTTGAAATCAAACACATTATGTTGCCACCTTCGAAAAGGGAGTTCAGAGATATTTATGTCGTTTTCGAGTTAATGGAATCTGATCTTCATCAAGTCATCAAAGCCAATGATGACTTGACACGCGAGCACTACCAGTTTTTCATTTACCAGCTTCTTCGTGCGTTAAAATATATCCACACAGCAAGTGTCTACCATAGAGATTTAAAGCCGAAGAACATATTGGCCAATGCGAATTGTAAACTTAAGATCTGTGATTTCGGATTGGCAAGAGTTGCATTCAGTGACACACCTTCAACAATATTTTGGACGGACTATGTTGCTACTAGGTGGTATAGGGCTCCAGAGCTATGTGGTTCATTTTTCTCAAAGTATACACCTGCAATTGATATATGGAGTATAGGTTGCATATTTGCTGAAGTATTAACAGGGAAGCCACTTTTTCCGGGAAAAAATGTTGTTCACCAGCTTGATTTGATCACGGATCTACTCGGAACACCTTCATTAGATACCATCTTTCGGGTACGGAATGATAAGGCTAGGAGATACTTAACAAGTATGAGGAAGAAGCAACCTGAGCCATTTGAACAGAAGTTCCCAAATGCTGATCCTCTAGCACTTCGCCTACTAGAAAGATTGCTTGCTTTCGATCCAAAAGATAGACCAACTGCTGCTGAGGCTCTGGCTGATCCCTACTTTAAAGGACTGGCTAAAGTCGAGAGAGAGCCTTCTTGCCAACCAATTACAAAAATGGAGTTCGAGTTTGAAAGACGCAAGATCACCAAGGAAGATATTAGAGAGCTAATCTTTCGTGAAATACTGGAGTACTATCCTCAACTGTTGAAAGATTATATGAACGGAACCGAAAGGACCAATTTTCTTTATCCAAGTGCTGTTGATCAGTTTAGGAAGCAGTTTGCGCATCTTGAAGAAAGTTGTGGTAAAAGTGGCCCAGTTATTCCGCTCGAAAGAAAGCATGTATCTCTTCCTAGGTCGGCTGTAGTACATTCGACTGCAATCCCCTCTAAAGAGCAATCCAATACTGCACTCTTCAAAGACAGGCAAATCCAGGAAGAAGCATATAACAACAAGCATTCTAAAGACACAGATGGAAACTCCGCTAATCCATCAAGGACTCTGCAGCCACCCCAACTGGTCTCACATGCCAAACCTGGAAGAGTTGTGGGACCCGTACTACCGTACGAAAACAGAACTAATATTGTAAAAGATGCATATGACCCAAGAACATTAACCCGAAGTCCGGGCCTTCCTCCTCAAGCGATGATCCCTTCTTCTGCATATTATTATCAGAAACCTAACAGTGTAAATCAAGAAAGACCAACTACAACTAATCATCAAGCTGAGCACCCTCGGAGTCAATGTAGCATGGTGGCCAAATTAGCACCCGATATAGCCATCAATATAGATTCCAACCCGTTTTTCATGACCCGAGCAGGAGTCACGAGCAAAACCGAACATACTGAACGGATTGTTATTGATGCAAACCTTTTGCAAGCTAAGTCTCATCAATATGGTATCAATGCTTCTGGTCCAACTGCCATAACGGGGGCTACTCATCGGAAGATCGGGACCGTTCAGTACAGTATGACGAGGATGTCTTAG 1872 42.31 MQQDHRRKSSIEVDFFSEYGDASRYKILEVIGKGSYGVVCSAIDTHTGEKVAIKKIHGIFEHLSDAARILREIKLLRLLRHPDIVEIKHIMLPPSKREFRDIYVVFELMESDLHQVIKANDDLTREHYQFFIYQLLRALKYIHTASVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPSTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSLDTIFRVRNDKARRYLTSMRKKQPEPFEQKFPNADPLALRLLERLLAFDPKDRPTAAEALADPYFKGLAKVEREPSCQPITKMEFEFERRKITKEDIRELIFREILEYYPQLLKDYMNGTERTNFLYPSAVDQFRKQFAHLEESCGKSGPVIPLERKHVSLPRSAVVHSTAIPSKEQSNTALFKDRQIQEEAYNNKHSKDTDGNSANPSRTLQPPQLVSHAKPGRVVGPVLPYENRTNIVKDAYDPRTLTRSPGLPPQAMIPSSAYYYQKPNSVNQERPTTTNHQAEHPRSQCSMVAKLAPDIAINIDSNPFFMTRAGVTSKTEHTERIVIDANLLQAKSHQYGINASGPTAITGATHRKIGTVQYSMTRMS 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
3 33561670 33566456 + Conep03aG0201200.1 Cone3ag1494 434953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone3ag1494 623 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 22 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cone3ag1494 623 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1494 623 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1494 623 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1494 623 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Cone3ag1494 623 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Cone3ag1494 623 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Cone3ag1494 623 MobiDBLite consensus disorder prediction 450 467 - -
Cone3ag1494 623 FunFam Mitogen-activated protein kinase 111 339 - -
Cone3ag1494 623 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Cone3ag1494 623 FunFam Mitogen-activated protein kinase 15 118 - -
Cone3ag1494 623 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone3ag1494 623 MobiDBLite consensus disorder prediction 444 476 - -
Cone3ag1494 623 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1527 Cone-Chr12:10784265 Cone3ag1494 Cone-Chr3:33561670 4.10E-293 dispersed
Cone14ag0812 Cone-Chr14:4836392 Cone3ag1494 Cone-Chr3:33561670 1.24E-258 dispersed
Cone14ag1014 Cone-Chr14:8491794 Cone3ag1494 Cone-Chr3:33561670 1.21E-131 dispersed
Cone15ag0811 Cone-Chr15:5034487 Cone3ag1494 Cone-Chr3:33561670 6.86E-258 dispersed
Cone2ag0757 Cone-Chr2:33377398 Cone3ag1494 Cone-Chr3:33561670 5.29E-230 dispersed
Cone3ag1494 Cone-Chr3:33561670 Cone8ag0764 Cone-Chr8:7689117 1.19E-112 dispersed
Cone3ag1494 Cone-Chr3:33561670 Cone6ag0146 Cone-Chr6:740829 1.56E-41 wgd
Cone3ag1494 Cone-Chr3:33561670 Cone8ag1572 Cone-Chr8:11722153 1.85E-255 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82713 PF00013 KH_1 3.40E-17 CL0007 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone3ag1494 - - - 0.0